Experiment: Thallium(I) acetate 0.09 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0643 and Psest_0644 are separated by 138 nucleotides Psest_0644 and Psest_0645 overlap by 17 nucleotides Psest_0645 and Psest_0646 overlap by 4 nucleotides Psest_0646 and Psest_0647 overlap by 4 nucleotides
Psest_0643: Psest_0643 - exodeoxyribonuclease VII, small subunit, at 698,321 to 698,563
_0643
Psest_0644: Psest_0644 - siderophore ferric iron reductase, AHA_1954 family, at 698,702 to 699,463
_0644
Psest_0645: Psest_0645 - Siderophore synthetase component, at 699,447 to 701,255
_0645
Psest_0646: Psest_0646 - Acetyltransferases, including N-acetylases of ribosomal proteins, at 701,252 to 701,839
_0646
Psest_0647: Psest_0647 - Arabinose efflux permease, at 701,836 to 702,990
_0647
Position (kb) 699
700
701
702 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 698.607 kb on + strand at 698.608 kb on - strand at 698.655 kb on + strand at 698.656 kb on - strand at 698.656 kb on - strand at 698.668 kb on - strand at 698.668 kb on - strand at 699.200 kb on + strand, within Psest_0644 at 699.200 kb on + strand, within Psest_0644 at 699.220 kb on - strand, within Psest_0644 at 699.220 kb on - strand, within Psest_0644 at 699.220 kb on - strand, within Psest_0644 at 699.220 kb on - strand, within Psest_0644 at 699.264 kb on + strand, within Psest_0644 at 699.264 kb on + strand, within Psest_0644 at 699.399 kb on - strand at 699.463 kb on + strand at 699.463 kb on + strand at 699.464 kb on - strand at 699.643 kb on + strand, within Psest_0645 at 699.946 kb on + strand, within Psest_0645 at 699.947 kb on - strand, within Psest_0645 at 699.947 kb on - strand, within Psest_0645 at 699.947 kb on - strand, within Psest_0645 at 699.947 kb on - strand, within Psest_0645 at 699.973 kb on + strand, within Psest_0645 at 699.974 kb on - strand, within Psest_0645 at 699.974 kb on - strand, within Psest_0645 at 700.186 kb on + strand, within Psest_0645 at 700.189 kb on + strand, within Psest_0645 at 700.190 kb on - strand, within Psest_0645 at 700.282 kb on + strand, within Psest_0645 at 700.282 kb on + strand, within Psest_0645 at 700.282 kb on + strand, within Psest_0645 at 700.282 kb on + strand, within Psest_0645 at 700.283 kb on - strand, within Psest_0645 at 700.283 kb on - strand, within Psest_0645 at 700.283 kb on - strand, within Psest_0645 at 700.283 kb on - strand, within Psest_0645 at 700.283 kb on - strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.312 kb on + strand, within Psest_0645 at 700.313 kb on - strand, within Psest_0645 at 700.313 kb on - strand, within Psest_0645 at 700.313 kb on - strand, within Psest_0645 at 700.313 kb on - strand, within Psest_0645 at 700.313 kb on - strand, within Psest_0645 at 700.313 kb on - strand, within Psest_0645 at 700.313 kb on - strand, within Psest_0645 at 700.313 kb on - strand, within Psest_0645 at 700.313 kb on - strand, within Psest_0645 at 700.313 kb on - strand, within Psest_0645 at 700.313 kb on - strand, within Psest_0645 at 700.313 kb on - strand, within Psest_0645 at 700.313 kb on - strand, within Psest_0645 at 700.453 kb on + strand, within Psest_0645 at 700.453 kb on + strand, within Psest_0645 at 700.454 kb on - strand, within Psest_0645 at 700.454 kb on - strand, within Psest_0645 at 700.454 kb on - strand, within Psest_0645 at 700.540 kb on + strand, within Psest_0645 at 700.540 kb on + strand, within Psest_0645 at 700.584 kb on + strand, within Psest_0645 at 700.584 kb on + strand, within Psest_0645 at 700.585 kb on - strand, within Psest_0645 at 700.585 kb on - strand, within Psest_0645 at 700.585 kb on - strand, within Psest_0645 at 700.617 kb on + strand, within Psest_0645 at 700.651 kb on + strand, within Psest_0645 at 700.651 kb on + strand, within Psest_0645 at 700.651 kb on + strand, within Psest_0645 at 700.652 kb on - strand, within Psest_0645 at 700.839 kb on - strand, within Psest_0645 at 700.861 kb on + strand, within Psest_0645 at 700.861 kb on + strand, within Psest_0645 at 700.861 kb on + strand, within Psest_0645 at 700.861 kb on + strand, within Psest_0645 at 700.861 kb on + strand, within Psest_0645 at 701.507 kb on + strand, within Psest_0646 at 701.507 kb on + strand, within Psest_0646 at 701.507 kb on + strand, within Psest_0646 at 701.507 kb on + strand, within Psest_0646 at 701.508 kb on - strand, within Psest_0646 at 701.508 kb on - strand, within Psest_0646 at 701.508 kb on - strand, within Psest_0646 at 701.661 kb on + strand, within Psest_0646 at 701.661 kb on + strand, within Psest_0646 at 701.662 kb on - strand, within Psest_0646 at 701.662 kb on - strand, within Psest_0646 at 701.662 kb on - strand, within Psest_0646 at 701.662 kb on - strand, within Psest_0646 at 701.662 kb on - strand, within Psest_0646 at 701.662 kb on - strand, within Psest_0646 at 701.712 kb on + strand, within Psest_0646 at 701.713 kb on - strand, within Psest_0646 at 701.793 kb on + strand at 702.041 kb on + strand, within Psest_0647 at 702.042 kb on - strand, within Psest_0647 at 702.099 kb on - strand, within Psest_0647 at 702.218 kb on + strand, within Psest_0647 at 702.218 kb on + strand, within Psest_0647 at 702.219 kb on - strand, within Psest_0647 at 702.219 kb on - strand, within Psest_0647
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.09 mg/ml remove 698,607 + +0.1 698,608 - -0.4 698,655 + -1.4 698,656 - +0.3 698,656 - -0.7 698,668 - +0.7 698,668 - -2.0 699,200 + Psest_0644 0.65 +0.3 699,200 + Psest_0644 0.65 +0.2 699,220 - Psest_0644 0.68 -2.0 699,220 - Psest_0644 0.68 -0.8 699,220 - Psest_0644 0.68 -0.1 699,220 - Psest_0644 0.68 +0.3 699,264 + Psest_0644 0.74 -0.6 699,264 + Psest_0644 0.74 -1.4 699,399 - -0.2 699,463 + +0.2 699,463 + -1.6 699,464 - +1.4 699,643 + Psest_0645 0.11 -2.1 699,946 + Psest_0645 0.28 -1.3 699,947 - Psest_0645 0.28 -1.4 699,947 - Psest_0645 0.28 -0.7 699,947 - Psest_0645 0.28 -2.3 699,947 - Psest_0645 0.28 -1.9 699,973 + Psest_0645 0.29 -1.4 699,974 - Psest_0645 0.29 -0.7 699,974 - Psest_0645 0.29 +0.2 700,186 + Psest_0645 0.41 -1.4 700,189 + Psest_0645 0.41 -1.5 700,190 - Psest_0645 0.41 -1.1 700,282 + Psest_0645 0.46 -2.9 700,282 + Psest_0645 0.46 -1.4 700,282 + Psest_0645 0.46 -1.0 700,282 + Psest_0645 0.46 -1.1 700,283 - Psest_0645 0.46 +0.6 700,283 - Psest_0645 0.46 -1.4 700,283 - Psest_0645 0.46 -0.2 700,283 - Psest_0645 0.46 -0.1 700,283 - Psest_0645 0.46 +0.2 700,312 + Psest_0645 0.48 -3.4 700,312 + Psest_0645 0.48 -0.5 700,312 + Psest_0645 0.48 +0.1 700,312 + Psest_0645 0.48 -0.2 700,312 + Psest_0645 0.48 -0.4 700,312 + Psest_0645 0.48 +1.6 700,312 + Psest_0645 0.48 -0.2 700,312 + Psest_0645 0.48 +0.5 700,312 + Psest_0645 0.48 -0.5 700,312 + Psest_0645 0.48 -0.7 700,312 + Psest_0645 0.48 -0.1 700,312 + Psest_0645 0.48 +1.9 700,312 + Psest_0645 0.48 -1.5 700,312 + Psest_0645 0.48 +0.6 700,312 + Psest_0645 0.48 -0.9 700,312 + Psest_0645 0.48 -0.6 700,312 + Psest_0645 0.48 +0.0 700,312 + Psest_0645 0.48 +0.3 700,312 + Psest_0645 0.48 +0.3 700,312 + Psest_0645 0.48 -0.5 700,313 - Psest_0645 0.48 +2.0 700,313 - Psest_0645 0.48 -1.7 700,313 - Psest_0645 0.48 -1.1 700,313 - Psest_0645 0.48 +0.3 700,313 - Psest_0645 0.48 -2.0 700,313 - Psest_0645 0.48 -2.1 700,313 - Psest_0645 0.48 -0.7 700,313 - Psest_0645 0.48 -1.5 700,313 - Psest_0645 0.48 +0.1 700,313 - Psest_0645 0.48 -0.3 700,313 - Psest_0645 0.48 -0.6 700,313 - Psest_0645 0.48 +0.7 700,313 - Psest_0645 0.48 +0.3 700,453 + Psest_0645 0.56 -0.2 700,453 + Psest_0645 0.56 +0.7 700,454 - Psest_0645 0.56 -1.3 700,454 - Psest_0645 0.56 -0.7 700,454 - Psest_0645 0.56 -0.3 700,540 + Psest_0645 0.60 -1.4 700,540 + Psest_0645 0.60 -1.0 700,584 + Psest_0645 0.63 -2.5 700,584 + Psest_0645 0.63 -1.7 700,585 - Psest_0645 0.63 -1.0 700,585 - Psest_0645 0.63 -1.1 700,585 - Psest_0645 0.63 -0.0 700,617 + Psest_0645 0.65 -1.1 700,651 + Psest_0645 0.67 -1.1 700,651 + Psest_0645 0.67 -0.1 700,651 + Psest_0645 0.67 -0.8 700,652 - Psest_0645 0.67 -2.5 700,839 - Psest_0645 0.77 +0.3 700,861 + Psest_0645 0.78 +0.3 700,861 + Psest_0645 0.78 -1.2 700,861 + Psest_0645 0.78 -0.5 700,861 + Psest_0645 0.78 -1.6 700,861 + Psest_0645 0.78 +1.8 701,507 + Psest_0646 0.43 +0.4 701,507 + Psest_0646 0.43 -0.9 701,507 + Psest_0646 0.43 +2.7 701,507 + Psest_0646 0.43 +0.4 701,508 - Psest_0646 0.44 +1.3 701,508 - Psest_0646 0.44 +0.0 701,508 - Psest_0646 0.44 +0.2 701,661 + Psest_0646 0.70 +0.7 701,661 + Psest_0646 0.70 -0.2 701,662 - Psest_0646 0.70 -1.2 701,662 - Psest_0646 0.70 -1.7 701,662 - Psest_0646 0.70 +0.3 701,662 - Psest_0646 0.70 +1.2 701,662 - Psest_0646 0.70 -0.5 701,662 - Psest_0646 0.70 -0.7 701,712 + Psest_0646 0.78 +1.5 701,713 - Psest_0646 0.78 -0.4 701,793 + +1.7 702,041 + Psest_0647 0.18 +0.9 702,042 - Psest_0647 0.18 +0.3 702,099 - Psest_0647 0.23 -1.1 702,218 + Psest_0647 0.33 -0.3 702,218 + Psest_0647 0.33 -0.3 702,219 - Psest_0647 0.33 +0.2 702,219 - Psest_0647 0.33 -0.4
Or see this region's nucleotide sequence