Experiment: Thallium(I) acetate 0.09 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3079 and Psest_3080 are separated by 251 nucleotides Psest_3080 and Psest_3081 are separated by 173 nucleotides
Psest_3079: Psest_3079 - L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) , at 3,257,199 to 3,260,360
_3079
Psest_3080: Psest_3080 - AraC-type DNA-binding domain-containing proteins, at 3,260,612 to 3,261,367
_3080
Psest_3081: Psest_3081 - ATP-dependent protease La, at 3,261,541 to 3,263,928
_3081
Position (kb)
3260
3261
3262 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3259.681 kb on + strand, within Psest_3079 at 3259.681 kb on + strand, within Psest_3079 at 3259.681 kb on + strand, within Psest_3079 at 3259.681 kb on + strand, within Psest_3079 at 3259.681 kb on + strand, within Psest_3079 at 3259.682 kb on - strand, within Psest_3079 at 3259.682 kb on - strand, within Psest_3079 at 3259.682 kb on - strand, within Psest_3079 at 3259.735 kb on + strand, within Psest_3079 at 3259.735 kb on + strand, within Psest_3079 at 3260.119 kb on + strand at 3260.258 kb on - strand at 3260.278 kb on + strand at 3260.278 kb on + strand at 3260.278 kb on + strand at 3260.278 kb on + strand at 3260.279 kb on - strand at 3260.279 kb on - strand at 3260.279 kb on - strand at 3260.279 kb on - strand at 3260.279 kb on - strand at 3260.399 kb on - strand at 3260.459 kb on + strand at 3260.459 kb on + strand at 3260.459 kb on + strand at 3260.494 kb on + strand at 3260.544 kb on + strand at 3260.574 kb on + strand at 3260.574 kb on + strand at 3260.574 kb on + strand at 3260.656 kb on - strand at 3260.781 kb on + strand, within Psest_3080 at 3261.028 kb on - strand, within Psest_3080 at 3261.052 kb on - strand, within Psest_3080 at 3261.511 kb on + strand at 3261.511 kb on + strand at 3261.511 kb on + strand at 3261.511 kb on + strand at 3261.511 kb on + strand at 3261.511 kb on + strand at 3261.511 kb on + strand at 3261.511 kb on + strand at 3261.511 kb on + strand at 3261.511 kb on + strand at 3261.511 kb on + strand at 3261.511 kb on + strand at 3261.512 kb on - strand at 3261.512 kb on - strand at 3261.512 kb on - strand at 3261.512 kb on - strand at 3261.512 kb on - strand at 3261.512 kb on - strand at 3261.512 kb on - strand at 3261.512 kb on - strand at 3261.512 kb on - strand at 3261.512 kb on - strand at 3261.512 kb on - strand at 3261.512 kb on - strand at 3261.512 kb on - strand at 3261.512 kb on - strand at 3261.522 kb on + strand at 3261.523 kb on - strand at 3261.523 kb on - strand at 3261.523 kb on - strand at 3261.603 kb on - strand at 3261.634 kb on + strand at 3261.634 kb on + strand at 3261.635 kb on - strand at 3261.635 kb on - strand at 3261.635 kb on - strand at 3261.635 kb on - strand at 3261.635 kb on - strand at 3261.635 kb on - strand at 3261.635 kb on - strand at 3261.635 kb on - strand at 3261.635 kb on - strand at 3261.787 kb on - strand, within Psest_3081 at 3262.048 kb on + strand, within Psest_3081 at 3262.048 kb on + strand, within Psest_3081 at 3262.049 kb on - strand, within Psest_3081 at 3262.069 kb on + strand, within Psest_3081 at 3262.069 kb on + strand, within Psest_3081 at 3262.070 kb on - strand, within Psest_3081 at 3262.070 kb on - strand, within Psest_3081
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.09 mg/ml remove 3,259,681 + Psest_3079 0.78 -1.2 3,259,681 + Psest_3079 0.78 +0.7 3,259,681 + Psest_3079 0.78 -0.1 3,259,681 + Psest_3079 0.78 -1.8 3,259,681 + Psest_3079 0.78 -0.9 3,259,682 - Psest_3079 0.79 -1.3 3,259,682 - Psest_3079 0.79 +0.2 3,259,682 - Psest_3079 0.79 +0.5 3,259,735 + Psest_3079 0.80 +0.1 3,259,735 + Psest_3079 0.80 -1.1 3,260,119 + +0.4 3,260,258 - -1.5 3,260,278 + +1.5 3,260,278 + -0.5 3,260,278 + +0.7 3,260,278 + +1.1 3,260,279 - +0.9 3,260,279 - -2.1 3,260,279 - +0.4 3,260,279 - +0.6 3,260,279 - -3.0 3,260,399 - -0.5 3,260,459 + +0.7 3,260,459 + +0.4 3,260,459 + -1.2 3,260,494 + +0.6 3,260,544 + +0.8 3,260,574 + -1.7 3,260,574 + +0.4 3,260,574 + -1.3 3,260,656 - -0.4 3,260,781 + Psest_3080 0.22 -0.2 3,261,028 - Psest_3080 0.55 -1.9 3,261,052 - Psest_3080 0.58 -2.4 3,261,511 + +0.9 3,261,511 + -0.5 3,261,511 + -1.4 3,261,511 + +0.1 3,261,511 + +0.4 3,261,511 + -1.4 3,261,511 + -0.8 3,261,511 + +1.1 3,261,511 + -0.5 3,261,511 + +2.0 3,261,511 + +0.2 3,261,511 + -0.1 3,261,512 - -1.6 3,261,512 - -0.1 3,261,512 - +0.7 3,261,512 - +2.1 3,261,512 - +1.3 3,261,512 - +0.3 3,261,512 - +1.4 3,261,512 - +1.0 3,261,512 - -0.6 3,261,512 - +0.6 3,261,512 - +2.0 3,261,512 - +0.7 3,261,512 - +0.8 3,261,512 - -0.4 3,261,522 + +0.8 3,261,523 - +0.8 3,261,523 - +0.1 3,261,523 - -0.3 3,261,603 - -0.7 3,261,634 + +0.2 3,261,634 + -0.2 3,261,635 - -1.2 3,261,635 - -0.8 3,261,635 - +0.6 3,261,635 - -0.3 3,261,635 - -0.2 3,261,635 - +1.0 3,261,635 - +2.1 3,261,635 - -1.0 3,261,635 - -0.4 3,261,787 - Psest_3081 0.10 -1.3 3,262,048 + Psest_3081 0.21 +0.9 3,262,048 + Psest_3081 0.21 +0.2 3,262,049 - Psest_3081 0.21 -0.8 3,262,069 + Psest_3081 0.22 -1.2 3,262,069 + Psest_3081 0.22 +1.6 3,262,070 - Psest_3081 0.22 -1.3 3,262,070 - Psest_3081 0.22 -0.4
Or see this region's nucleotide sequence