Experiment: Thallium(I) acetate 0.09 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2980 and Psest_2981 are separated by 22 nucleotides Psest_2981 and Psest_2982 are separated by 140 nucleotides Psest_2982 and Psest_2983 are separated by 335 nucleotides Psest_2983 and Psest_2984 are separated by 51 nucleotides
Psest_2980: Psest_2980 - oxaloacetate decarboxylase alpha subunit, at 3,171,704 to 3,173,482
_2980
Psest_2981: Psest_2981 - sodium pump decarboxylases, gamma subunit, at 3,173,505 to 3,173,747
_2981
Psest_2982: Psest_2982 - Mg2+ transporter (mgtE), at 3,173,888 to 3,175,324
_2982
Psest_2983: Psest_2983 - hypothetical protein, at 3,175,660 to 3,176,142
_2983
Psest_2984: Psest_2984 - tRNA_Arg_ACG, at 3,176,194 to 3,176,270
_2984
Position (kb)
3173
3174
3175
3176 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3172.921 kb on + strand, within Psest_2980 at 3172.922 kb on - strand, within Psest_2980 at 3172.922 kb on - strand, within Psest_2980 at 3172.923 kb on + strand, within Psest_2980 at 3172.923 kb on + strand, within Psest_2980 at 3172.923 kb on + strand, within Psest_2980 at 3172.923 kb on + strand, within Psest_2980 at 3172.924 kb on - strand, within Psest_2980 at 3172.924 kb on - strand, within Psest_2980 at 3172.924 kb on - strand, within Psest_2980 at 3172.924 kb on - strand, within Psest_2980 at 3173.037 kb on + strand, within Psest_2980 at 3173.255 kb on - strand, within Psest_2980 at 3173.309 kb on - strand at 3173.309 kb on - strand at 3173.470 kb on + strand at 3173.638 kb on + strand, within Psest_2981 at 3173.638 kb on + strand, within Psest_2981 at 3173.638 kb on + strand, within Psest_2981 at 3173.796 kb on - strand at 3173.889 kb on + strand at 3173.890 kb on - strand at 3175.378 kb on - strand at 3175.378 kb on - strand at 3175.378 kb on - strand at 3175.417 kb on - strand at 3175.472 kb on - strand at 3175.472 kb on - strand at 3175.472 kb on - strand at 3175.472 kb on - strand at 3175.472 kb on - strand at 3175.614 kb on + strand at 3175.614 kb on + strand at 3175.615 kb on - strand at 3175.615 kb on - strand at 3175.668 kb on - strand at 3175.673 kb on + strand at 3175.673 kb on + strand at 3175.673 kb on + strand at 3175.674 kb on - strand at 3175.674 kb on - strand at 3175.694 kb on + strand at 3175.695 kb on - strand at 3176.039 kb on + strand, within Psest_2983 at 3176.039 kb on + strand, within Psest_2983 at 3176.039 kb on + strand, within Psest_2983 at 3176.245 kb on - strand, within Psest_2984 at 3176.263 kb on - strand at 3176.263 kb on - strand at 3176.263 kb on - strand at 3176.273 kb on - strand at 3176.273 kb on - strand at 3176.273 kb on - strand at 3176.273 kb on - strand at 3176.273 kb on - strand at 3176.273 kb on - strand at 3176.273 kb on - strand at 3176.284 kb on - strand at 3176.284 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.09 mg/ml remove 3,172,921 + Psest_2980 0.68 +0.1 3,172,922 - Psest_2980 0.68 +1.2 3,172,922 - Psest_2980 0.68 -0.3 3,172,923 + Psest_2980 0.69 -0.7 3,172,923 + Psest_2980 0.69 -0.0 3,172,923 + Psest_2980 0.69 -0.3 3,172,923 + Psest_2980 0.69 -0.9 3,172,924 - Psest_2980 0.69 -1.3 3,172,924 - Psest_2980 0.69 +0.2 3,172,924 - Psest_2980 0.69 -1.0 3,172,924 - Psest_2980 0.69 -0.6 3,173,037 + Psest_2980 0.75 -0.6 3,173,255 - Psest_2980 0.87 -0.8 3,173,309 - +1.7 3,173,309 - +2.2 3,173,470 + -1.7 3,173,638 + Psest_2981 0.55 -1.2 3,173,638 + Psest_2981 0.55 -0.5 3,173,638 + Psest_2981 0.55 -0.6 3,173,796 - -1.9 3,173,889 + -0.0 3,173,890 - -1.0 3,175,378 - -1.9 3,175,378 - -1.0 3,175,378 - +1.9 3,175,417 - +0.5 3,175,472 - +0.7 3,175,472 - -1.1 3,175,472 - -1.3 3,175,472 - +1.1 3,175,472 - +0.7 3,175,614 + +0.2 3,175,614 + +2.4 3,175,615 - -1.8 3,175,615 - -0.1 3,175,668 - -1.4 3,175,673 + -2.8 3,175,673 + +0.6 3,175,673 + -0.5 3,175,674 - +2.4 3,175,674 - -0.3 3,175,694 + -0.2 3,175,695 - -0.5 3,176,039 + Psest_2983 0.78 -0.3 3,176,039 + Psest_2983 0.78 +1.7 3,176,039 + Psest_2983 0.78 +1.4 3,176,245 - Psest_2984 0.66 +0.4 3,176,263 - +1.5 3,176,263 - -1.5 3,176,263 - -0.8 3,176,273 - +0.2 3,176,273 - -1.5 3,176,273 - +0.1 3,176,273 - -0.1 3,176,273 - +1.4 3,176,273 - +0.1 3,176,273 - -0.7 3,176,284 - +0.2 3,176,284 - +0.2
Or see this region's nucleotide sequence