Experiment: Thallium(I) acetate 0.09 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2560 and Psest_2561 are separated by 9 nucleotides Psest_2561 and Psest_2562 are separated by 1 nucleotides Psest_2562 and Psest_2563 are separated by 49 nucleotides
Psest_2560: Psest_2560 - Zinc metalloprotease (elastase), at 2,741,818 to 2,742,861
_2560
Psest_2561: Psest_2561 - hypothetical protein, at 2,742,871 to 2,743,203
_2561
Psest_2562: Psest_2562 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 2,743,205 to 2,745,541
_2562
Psest_2563: Psest_2563 - Arabinose efflux permease, at 2,745,591 to 2,746,826
_2563
Position (kb)
2743
2744
2745
2746 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2742.353 kb on - strand, within Psest_2560 at 2742.353 kb on - strand, within Psest_2560 at 2742.353 kb on - strand, within Psest_2560 at 2742.529 kb on + strand, within Psest_2560 at 2742.529 kb on + strand, within Psest_2560 at 2742.529 kb on + strand, within Psest_2560 at 2742.618 kb on + strand, within Psest_2560 at 2742.618 kb on + strand, within Psest_2560 at 2742.619 kb on - strand, within Psest_2560 at 2742.646 kb on + strand, within Psest_2560 at 2742.647 kb on - strand, within Psest_2560 at 2742.647 kb on - strand, within Psest_2560 at 2742.674 kb on - strand, within Psest_2560 at 2742.848 kb on + strand at 2742.859 kb on + strand at 2742.912 kb on - strand, within Psest_2561 at 2743.201 kb on + strand at 2743.337 kb on + strand at 2743.338 kb on - strand at 2743.482 kb on + strand, within Psest_2562 at 2743.482 kb on + strand, within Psest_2562 at 2743.482 kb on + strand, within Psest_2562 at 2743.590 kb on - strand, within Psest_2562 at 2743.590 kb on - strand, within Psest_2562 at 2743.651 kb on + strand, within Psest_2562 at 2743.651 kb on + strand, within Psest_2562 at 2743.651 kb on + strand, within Psest_2562 at 2743.651 kb on + strand, within Psest_2562 at 2743.651 kb on + strand, within Psest_2562 at 2743.651 kb on + strand, within Psest_2562 at 2743.651 kb on + strand, within Psest_2562 at 2743.651 kb on + strand, within Psest_2562 at 2743.652 kb on - strand, within Psest_2562 at 2743.652 kb on - strand, within Psest_2562 at 2743.652 kb on - strand, within Psest_2562 at 2743.921 kb on - strand, within Psest_2562 at 2744.052 kb on + strand, within Psest_2562 at 2744.052 kb on + strand, within Psest_2562 at 2744.052 kb on + strand, within Psest_2562 at 2744.052 kb on + strand, within Psest_2562 at 2744.053 kb on - strand, within Psest_2562 at 2744.053 kb on - strand, within Psest_2562 at 2744.118 kb on - strand, within Psest_2562 at 2744.403 kb on + strand, within Psest_2562 at 2744.404 kb on - strand, within Psest_2562 at 2744.404 kb on - strand, within Psest_2562 at 2744.404 kb on - strand, within Psest_2562 at 2744.404 kb on - strand, within Psest_2562 at 2744.444 kb on - strand, within Psest_2562 at 2744.520 kb on + strand, within Psest_2562 at 2744.617 kb on + strand, within Psest_2562 at 2744.638 kb on - strand, within Psest_2562 at 2744.718 kb on + strand, within Psest_2562 at 2744.718 kb on + strand, within Psest_2562 at 2744.718 kb on + strand, within Psest_2562 at 2744.719 kb on - strand, within Psest_2562 at 2744.719 kb on - strand, within Psest_2562 at 2744.719 kb on - strand, within Psest_2562 at 2744.719 kb on - strand, within Psest_2562 at 2744.779 kb on - strand, within Psest_2562 at 2744.779 kb on - strand, within Psest_2562 at 2744.779 kb on - strand, within Psest_2562 at 2744.779 kb on - strand, within Psest_2562 at 2744.779 kb on - strand, within Psest_2562 at 2745.121 kb on + strand, within Psest_2562 at 2745.121 kb on + strand, within Psest_2562 at 2745.122 kb on - strand, within Psest_2562 at 2745.122 kb on - strand, within Psest_2562 at 2745.847 kb on - strand, within Psest_2563 at 2746.103 kb on - strand, within Psest_2563 at 2746.115 kb on + strand, within Psest_2563 at 2746.115 kb on + strand, within Psest_2563 at 2746.115 kb on + strand, within Psest_2563 at 2746.115 kb on + strand, within Psest_2563 at 2746.115 kb on + strand, within Psest_2563 at 2746.115 kb on + strand, within Psest_2563 at 2746.115 kb on + strand, within Psest_2563 at 2746.116 kb on - strand, within Psest_2563 at 2746.116 kb on - strand, within Psest_2563 at 2746.116 kb on - strand, within Psest_2563 at 2746.116 kb on - strand, within Psest_2563 at 2746.171 kb on + strand, within Psest_2563 at 2746.171 kb on + strand, within Psest_2563 at 2746.171 kb on + strand, within Psest_2563 at 2746.171 kb on + strand, within Psest_2563 at 2746.171 kb on + strand, within Psest_2563 at 2746.172 kb on - strand, within Psest_2563 at 2746.182 kb on + strand, within Psest_2563 at 2746.183 kb on - strand, within Psest_2563 at 2746.275 kb on + strand, within Psest_2563 at 2746.276 kb on - strand, within Psest_2563 at 2746.276 kb on - strand, within Psest_2563 at 2746.276 kb on - strand, within Psest_2563 at 2746.282 kb on + strand, within Psest_2563 at 2746.282 kb on + strand, within Psest_2563 at 2746.283 kb on - strand, within Psest_2563 at 2746.283 kb on - strand, within Psest_2563
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.09 mg/ml remove 2,742,353 - Psest_2560 0.51 +1.2 2,742,353 - Psest_2560 0.51 +1.7 2,742,353 - Psest_2560 0.51 -1.4 2,742,529 + Psest_2560 0.68 -0.4 2,742,529 + Psest_2560 0.68 +0.7 2,742,529 + Psest_2560 0.68 -1.1 2,742,618 + Psest_2560 0.77 -0.6 2,742,618 + Psest_2560 0.77 -2.3 2,742,619 - Psest_2560 0.77 -0.6 2,742,646 + Psest_2560 0.79 +0.6 2,742,647 - Psest_2560 0.79 -0.3 2,742,647 - Psest_2560 0.79 +1.6 2,742,674 - Psest_2560 0.82 +1.0 2,742,848 + +1.0 2,742,859 + +0.3 2,742,912 - Psest_2561 0.12 +0.4 2,743,201 + +1.3 2,743,337 + -1.5 2,743,338 - -1.1 2,743,482 + Psest_2562 0.12 -0.4 2,743,482 + Psest_2562 0.12 +0.2 2,743,482 + Psest_2562 0.12 -1.3 2,743,590 - Psest_2562 0.16 +0.2 2,743,590 - Psest_2562 0.16 +0.2 2,743,651 + Psest_2562 0.19 -1.6 2,743,651 + Psest_2562 0.19 +0.6 2,743,651 + Psest_2562 0.19 +0.4 2,743,651 + Psest_2562 0.19 +3.0 2,743,651 + Psest_2562 0.19 +0.5 2,743,651 + Psest_2562 0.19 +0.1 2,743,651 + Psest_2562 0.19 -0.8 2,743,651 + Psest_2562 0.19 -1.8 2,743,652 - Psest_2562 0.19 -1.5 2,743,652 - Psest_2562 0.19 +1.6 2,743,652 - Psest_2562 0.19 -0.4 2,743,921 - Psest_2562 0.31 +1.6 2,744,052 + Psest_2562 0.36 +0.9 2,744,052 + Psest_2562 0.36 -0.5 2,744,052 + Psest_2562 0.36 +1.7 2,744,052 + Psest_2562 0.36 -0.3 2,744,053 - Psest_2562 0.36 -1.1 2,744,053 - Psest_2562 0.36 +0.8 2,744,118 - Psest_2562 0.39 +0.6 2,744,403 + Psest_2562 0.51 -0.3 2,744,404 - Psest_2562 0.51 -0.9 2,744,404 - Psest_2562 0.51 +0.7 2,744,404 - Psest_2562 0.51 -1.9 2,744,404 - Psest_2562 0.51 +1.2 2,744,444 - Psest_2562 0.53 +1.1 2,744,520 + Psest_2562 0.56 +1.5 2,744,617 + Psest_2562 0.60 +0.4 2,744,638 - Psest_2562 0.61 +0.3 2,744,718 + Psest_2562 0.65 +0.6 2,744,718 + Psest_2562 0.65 -1.4 2,744,718 + Psest_2562 0.65 +0.4 2,744,719 - Psest_2562 0.65 +0.2 2,744,719 - Psest_2562 0.65 -0.3 2,744,719 - Psest_2562 0.65 -0.1 2,744,719 - Psest_2562 0.65 +0.0 2,744,779 - Psest_2562 0.67 -1.7 2,744,779 - Psest_2562 0.67 -1.9 2,744,779 - Psest_2562 0.67 -0.6 2,744,779 - Psest_2562 0.67 -2.7 2,744,779 - Psest_2562 0.67 +0.4 2,745,121 + Psest_2562 0.82 +0.3 2,745,121 + Psest_2562 0.82 -0.2 2,745,122 - Psest_2562 0.82 +1.9 2,745,122 - Psest_2562 0.82 +0.9 2,745,847 - Psest_2563 0.21 +0.5 2,746,103 - Psest_2563 0.41 -2.6 2,746,115 + Psest_2563 0.42 -0.2 2,746,115 + Psest_2563 0.42 +1.0 2,746,115 + Psest_2563 0.42 +0.4 2,746,115 + Psest_2563 0.42 +0.8 2,746,115 + Psest_2563 0.42 -1.4 2,746,115 + Psest_2563 0.42 -0.9 2,746,115 + Psest_2563 0.42 -0.3 2,746,116 - Psest_2563 0.42 +1.0 2,746,116 - Psest_2563 0.42 +0.9 2,746,116 - Psest_2563 0.42 -1.2 2,746,116 - Psest_2563 0.42 -2.6 2,746,171 + Psest_2563 0.47 +0.7 2,746,171 + Psest_2563 0.47 -1.6 2,746,171 + Psest_2563 0.47 -0.1 2,746,171 + Psest_2563 0.47 -0.3 2,746,171 + Psest_2563 0.47 -2.1 2,746,172 - Psest_2563 0.47 +0.5 2,746,182 + Psest_2563 0.48 +1.8 2,746,183 - Psest_2563 0.48 +0.6 2,746,275 + Psest_2563 0.55 +1.1 2,746,276 - Psest_2563 0.55 +0.8 2,746,276 - Psest_2563 0.55 +0.5 2,746,276 - Psest_2563 0.55 -0.3 2,746,282 + Psest_2563 0.56 -0.7 2,746,282 + Psest_2563 0.56 -0.1 2,746,283 - Psest_2563 0.56 -2.7 2,746,283 - Psest_2563 0.56 +0.2
Or see this region's nucleotide sequence