Experiment: Thallium(I) acetate 0.09 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2427 and Psest_2428 are separated by 7 nucleotides Psest_2428 and Psest_2429 overlap by 4 nucleotides Psest_2429 and Psest_2430 are separated by 194 nucleotides
Psest_2427: Psest_2427 - SH3 domain protein, at 2,592,562 to 2,593,236
_2427
Psest_2428: Psest_2428 - hypothetical protein, at 2,593,244 to 2,593,555
_2428
Psest_2429: Psest_2429 - Predicted branched-chain amino acid permease (azaleucine resistance), at 2,593,552 to 2,594,169
_2429
Psest_2430: Psest_2430 - AraC-type DNA-binding domain-containing proteins, at 2,594,364 to 2,595,170
_2430
Position (kb)
2593
2594 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2592.569 kb on + strand at 2592.569 kb on + strand at 2592.569 kb on + strand at 2592.569 kb on + strand at 2592.569 kb on + strand at 2592.570 kb on - strand at 2592.570 kb on - strand at 2592.570 kb on - strand at 2592.570 kb on - strand at 2592.723 kb on + strand, within Psest_2427 at 2592.723 kb on + strand, within Psest_2427 at 2592.723 kb on + strand, within Psest_2427 at 2592.817 kb on + strand, within Psest_2427 at 2592.971 kb on + strand, within Psest_2427 at 2592.972 kb on - strand, within Psest_2427 at 2593.135 kb on + strand, within Psest_2427 at 2593.135 kb on + strand, within Psest_2427 at 2593.135 kb on + strand, within Psest_2427 at 2593.135 kb on + strand, within Psest_2427 at 2593.135 kb on + strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.136 kb on - strand, within Psest_2427 at 2593.242 kb on + strand at 2593.255 kb on - strand at 2593.255 kb on - strand at 2593.255 kb on - strand at 2593.269 kb on + strand at 2593.269 kb on + strand at 2593.269 kb on + strand at 2593.269 kb on + strand at 2593.270 kb on - strand at 2593.272 kb on + strand at 2593.272 kb on + strand at 2593.272 kb on + strand at 2593.272 kb on + strand at 2593.272 kb on + strand at 2593.273 kb on - strand at 2593.273 kb on - strand at 2593.273 kb on - strand at 2593.273 kb on - strand at 2593.273 kb on - strand at 2593.273 kb on - strand at 2593.273 kb on - strand at 2593.273 kb on - strand at 2593.273 kb on - strand at 2593.302 kb on - strand, within Psest_2428 at 2593.398 kb on + strand, within Psest_2428 at 2593.398 kb on + strand, within Psest_2428 at 2593.399 kb on - strand, within Psest_2428 at 2593.399 kb on - strand, within Psest_2428 at 2593.399 kb on - strand, within Psest_2428 at 2593.399 kb on - strand, within Psest_2428 at 2593.399 kb on - strand, within Psest_2428 at 2593.610 kb on + strand at 2593.611 kb on - strand at 2593.611 kb on - strand at 2593.611 kb on - strand at 2593.794 kb on + strand, within Psest_2429 at 2593.794 kb on + strand, within Psest_2429 at 2593.795 kb on - strand, within Psest_2429 at 2593.795 kb on - strand, within Psest_2429 at 2593.795 kb on - strand, within Psest_2429 at 2593.795 kb on - strand, within Psest_2429 at 2593.795 kb on - strand, within Psest_2429 at 2593.795 kb on - strand, within Psest_2429 at 2593.911 kb on - strand, within Psest_2429 at 2593.911 kb on - strand, within Psest_2429 at 2593.911 kb on - strand, within Psest_2429 at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.211 kb on + strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.212 kb on - strand at 2594.213 kb on + strand at 2594.213 kb on + strand at 2594.213 kb on + strand at 2594.213 kb on + strand at 2594.213 kb on + strand at 2594.214 kb on - strand at 2594.436 kb on - strand at 2594.536 kb on + strand, within Psest_2430
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.09 mg/ml remove 2,592,569 + -1.1 2,592,569 + -1.6 2,592,569 + -2.3 2,592,569 + -0.7 2,592,569 + -0.3 2,592,570 - -1.2 2,592,570 - +0.1 2,592,570 - -1.1 2,592,570 - -1.1 2,592,723 + Psest_2427 0.24 +0.2 2,592,723 + Psest_2427 0.24 -1.4 2,592,723 + Psest_2427 0.24 -1.1 2,592,817 + Psest_2427 0.38 -0.5 2,592,971 + Psest_2427 0.61 -1.6 2,592,972 - Psest_2427 0.61 -0.5 2,593,135 + Psest_2427 0.85 -2.3 2,593,135 + Psest_2427 0.85 +0.2 2,593,135 + Psest_2427 0.85 -0.3 2,593,135 + Psest_2427 0.85 -1.4 2,593,135 + Psest_2427 0.85 +0.3 2,593,136 - Psest_2427 0.85 -0.2 2,593,136 - Psest_2427 0.85 -0.9 2,593,136 - Psest_2427 0.85 -2.3 2,593,136 - Psest_2427 0.85 -0.2 2,593,136 - Psest_2427 0.85 -0.4 2,593,136 - Psest_2427 0.85 -0.8 2,593,136 - Psest_2427 0.85 +0.2 2,593,136 - Psest_2427 0.85 -0.5 2,593,136 - Psest_2427 0.85 -0.6 2,593,136 - Psest_2427 0.85 -0.2 2,593,242 + -1.6 2,593,255 - -0.4 2,593,255 - -0.5 2,593,255 - +0.2 2,593,269 + +0.7 2,593,269 + +1.0 2,593,269 + +1.2 2,593,269 + -0.3 2,593,270 - +0.7 2,593,272 + -0.2 2,593,272 + -0.5 2,593,272 + -0.9 2,593,272 + +0.6 2,593,272 + -0.1 2,593,273 - +1.0 2,593,273 - +0.3 2,593,273 - -0.7 2,593,273 - +1.4 2,593,273 - -0.8 2,593,273 - -1.1 2,593,273 - +1.6 2,593,273 - -1.6 2,593,273 - +0.5 2,593,302 - Psest_2428 0.19 -0.4 2,593,398 + Psest_2428 0.49 -0.4 2,593,398 + Psest_2428 0.49 -0.3 2,593,399 - Psest_2428 0.50 -2.8 2,593,399 - Psest_2428 0.50 -0.1 2,593,399 - Psest_2428 0.50 +0.6 2,593,399 - Psest_2428 0.50 -2.1 2,593,399 - Psest_2428 0.50 -1.1 2,593,610 + -0.6 2,593,611 - +0.1 2,593,611 - +0.3 2,593,611 - +0.1 2,593,794 + Psest_2429 0.39 +0.1 2,593,794 + Psest_2429 0.39 -1.4 2,593,795 - Psest_2429 0.39 -1.9 2,593,795 - Psest_2429 0.39 +2.9 2,593,795 - Psest_2429 0.39 -0.1 2,593,795 - Psest_2429 0.39 -2.1 2,593,795 - Psest_2429 0.39 -0.8 2,593,795 - Psest_2429 0.39 +0.8 2,593,911 - Psest_2429 0.58 +1.1 2,593,911 - Psest_2429 0.58 +0.2 2,593,911 - Psest_2429 0.58 +1.3 2,594,211 + +2.9 2,594,211 + -0.7 2,594,211 + -0.7 2,594,211 + +0.8 2,594,211 + -2.0 2,594,211 + -0.6 2,594,211 + -1.1 2,594,211 + -1.9 2,594,211 + +0.6 2,594,211 + +1.0 2,594,211 + +0.7 2,594,211 + +0.1 2,594,211 + +0.9 2,594,212 - -1.0 2,594,212 - +0.7 2,594,212 - +0.4 2,594,212 - +0.2 2,594,212 - +1.1 2,594,212 - +1.8 2,594,212 - -0.0 2,594,212 - -0.3 2,594,212 - -1.3 2,594,212 - -0.9 2,594,212 - -0.8 2,594,213 + -1.9 2,594,213 + +0.9 2,594,213 + +0.3 2,594,213 + +1.4 2,594,213 + +0.6 2,594,214 - -0.2 2,594,436 - -0.1 2,594,536 + Psest_2430 0.21 -0.2
Or see this region's nucleotide sequence