Experiment: Thallium(I) acetate 0.09 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1727 and Psest_1728 are separated by 242 nucleotides Psest_1728 and Psest_1729 are separated by 12 nucleotides
Psest_1727: Psest_1727 - Flagellar hook-length control protein, at 1,833,221 to 1,834,462
_1727
Psest_1728: Psest_1728 - Flagellar basal body-associated protein, at 1,834,705 to 1,835,238
_1728
Psest_1729: Psest_1729 - flagellar motor switch protein FliM, at 1,835,251 to 1,836,222
_1729
Position (kb)
1834
1835
1836 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1834.659 kb on - strand at 1834.665 kb on + strand at 1834.666 kb on - strand at 1834.677 kb on + strand at 1834.677 kb on + strand at 1834.678 kb on - strand at 1834.678 kb on - strand at 1834.811 kb on + strand, within Psest_1728 at 1834.926 kb on + strand, within Psest_1728 at 1834.927 kb on - strand, within Psest_1728 at 1834.927 kb on - strand, within Psest_1728 at 1834.930 kb on + strand, within Psest_1728 at 1834.931 kb on - strand, within Psest_1728 at 1834.931 kb on - strand, within Psest_1728 at 1834.931 kb on - strand, within Psest_1728 at 1834.988 kb on - strand, within Psest_1728 at 1834.988 kb on - strand, within Psest_1728 at 1834.988 kb on - strand, within Psest_1728 at 1834.988 kb on - strand, within Psest_1728 at 1835.052 kb on + strand, within Psest_1728 at 1835.052 kb on + strand, within Psest_1728 at 1835.053 kb on - strand, within Psest_1728 at 1835.053 kb on - strand, within Psest_1728 at 1835.236 kb on + strand at 1835.236 kb on + strand at 1835.237 kb on - strand at 1835.237 kb on - strand at 1835.524 kb on + strand, within Psest_1729 at 1835.525 kb on - strand, within Psest_1729 at 1835.539 kb on + strand, within Psest_1729 at 1835.539 kb on + strand, within Psest_1729 at 1835.539 kb on + strand, within Psest_1729 at 1835.540 kb on - strand, within Psest_1729 at 1835.540 kb on - strand, within Psest_1729 at 1835.540 kb on - strand, within Psest_1729 at 1835.782 kb on + strand, within Psest_1729 at 1836.233 kb on + strand at 1836.234 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.09 mg/ml remove 1,834,659 - -0.3 1,834,665 + +1.3 1,834,666 - -0.2 1,834,677 + -0.4 1,834,677 + -0.2 1,834,678 - +0.4 1,834,678 - +1.3 1,834,811 + Psest_1728 0.20 -2.3 1,834,926 + Psest_1728 0.41 +0.3 1,834,927 - Psest_1728 0.42 +0.1 1,834,927 - Psest_1728 0.42 -1.7 1,834,930 + Psest_1728 0.42 -3.0 1,834,931 - Psest_1728 0.42 +0.5 1,834,931 - Psest_1728 0.42 -0.2 1,834,931 - Psest_1728 0.42 -0.1 1,834,988 - Psest_1728 0.53 -0.8 1,834,988 - Psest_1728 0.53 -1.9 1,834,988 - Psest_1728 0.53 -1.4 1,834,988 - Psest_1728 0.53 -1.0 1,835,052 + Psest_1728 0.65 -2.4 1,835,052 + Psest_1728 0.65 -1.5 1,835,053 - Psest_1728 0.65 -1.5 1,835,053 - Psest_1728 0.65 +0.7 1,835,236 + +1.6 1,835,236 + +0.4 1,835,237 - -1.3 1,835,237 - +0.3 1,835,524 + Psest_1729 0.28 +0.5 1,835,525 - Psest_1729 0.28 -0.2 1,835,539 + Psest_1729 0.30 +1.0 1,835,539 + Psest_1729 0.30 +0.7 1,835,539 + Psest_1729 0.30 -0.9 1,835,540 - Psest_1729 0.30 +0.3 1,835,540 - Psest_1729 0.30 -0.4 1,835,540 - Psest_1729 0.30 -0.2 1,835,782 + Psest_1729 0.55 +2.9 1,836,233 + +3.1 1,836,234 - -0.1
Or see this region's nucleotide sequence