Experiment: Thallium(I) acetate 0.09 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1155 and Psest_1156 are separated by 81 nucleotides Psest_1156 and Psest_1157 are separated by 2 nucleotides
Psest_1155: Psest_1155 - Methyl-accepting chemotaxis protein, at 1,254,172 to 1,255,794
_1155
Psest_1156: Psest_1156 - outer membrane component of uptake system, probably for ferrous iron (from data) , at 1,255,876 to 1,256,970
_1156
Psest_1157: Psest_1157 - Predicted periplasmic lipoprotein, at 1,256,973 to 1,258,049
_1157
Position (kb)
1255
1256
1257 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1255.388 kb on + strand, within Psest_1155 at 1255.388 kb on + strand, within Psest_1155 at 1255.388 kb on + strand, within Psest_1155 at 1255.388 kb on + strand, within Psest_1155 at 1255.388 kb on + strand, within Psest_1155 at 1255.388 kb on + strand, within Psest_1155 at 1255.389 kb on - strand, within Psest_1155 at 1255.389 kb on - strand, within Psest_1155 at 1255.389 kb on - strand, within Psest_1155 at 1255.389 kb on - strand, within Psest_1155 at 1255.389 kb on - strand, within Psest_1155 at 1255.486 kb on + strand, within Psest_1155 at 1255.492 kb on + strand, within Psest_1155 at 1255.492 kb on + strand, within Psest_1155 at 1255.492 kb on + strand, within Psest_1155 at 1255.492 kb on + strand, within Psest_1155 at 1255.492 kb on + strand, within Psest_1155 at 1255.492 kb on + strand, within Psest_1155 at 1255.492 kb on + strand, within Psest_1155 at 1255.493 kb on - strand, within Psest_1155 at 1255.493 kb on - strand, within Psest_1155 at 1255.695 kb on + strand at 1255.808 kb on + strand at 1255.809 kb on - strand at 1255.809 kb on - strand at 1255.809 kb on - strand at 1255.877 kb on + strand at 1255.878 kb on - strand at 1255.878 kb on - strand at 1255.888 kb on + strand at 1255.888 kb on + strand at 1255.888 kb on + strand at 1255.888 kb on + strand at 1255.889 kb on - strand at 1255.889 kb on - strand at 1255.889 kb on - strand at 1255.889 kb on - strand at 1256.088 kb on + strand, within Psest_1156 at 1256.088 kb on + strand, within Psest_1156 at 1256.151 kb on - strand, within Psest_1156 at 1256.258 kb on + strand, within Psest_1156 at 1256.259 kb on - strand, within Psest_1156 at 1256.601 kb on - strand, within Psest_1156 at 1256.601 kb on - strand, within Psest_1156 at 1256.601 kb on - strand, within Psest_1156 at 1256.601 kb on - strand, within Psest_1156 at 1256.640 kb on - strand, within Psest_1156 at 1256.640 kb on - strand, within Psest_1156 at 1256.705 kb on + strand, within Psest_1156 at 1256.705 kb on + strand, within Psest_1156 at 1256.706 kb on - strand, within Psest_1156 at 1256.706 kb on - strand, within Psest_1156 at 1256.706 kb on - strand, within Psest_1156 at 1256.754 kb on - strand, within Psest_1156 at 1256.754 kb on - strand, within Psest_1156 at 1257.067 kb on + strand at 1257.068 kb on - strand at 1257.316 kb on + strand, within Psest_1157 at 1257.570 kb on - strand, within Psest_1157 at 1257.610 kb on + strand, within Psest_1157 at 1257.611 kb on - strand, within Psest_1157 at 1257.611 kb on - strand, within Psest_1157 at 1257.623 kb on + strand, within Psest_1157 at 1257.624 kb on - strand, within Psest_1157 at 1257.915 kb on - strand, within Psest_1157 at 1257.916 kb on + strand, within Psest_1157 at 1257.916 kb on + strand, within Psest_1157 at 1257.916 kb on + strand, within Psest_1157 at 1257.917 kb on - strand, within Psest_1157 at 1257.917 kb on - strand, within Psest_1157 at 1257.917 kb on - strand, within Psest_1157 at 1257.930 kb on + strand, within Psest_1157 at 1257.931 kb on - strand, within Psest_1157
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.09 mg/ml remove 1,255,388 + Psest_1155 0.75 -0.7 1,255,388 + Psest_1155 0.75 +1.1 1,255,388 + Psest_1155 0.75 +0.6 1,255,388 + Psest_1155 0.75 -1.0 1,255,388 + Psest_1155 0.75 -0.1 1,255,388 + Psest_1155 0.75 -0.4 1,255,389 - Psest_1155 0.75 +0.4 1,255,389 - Psest_1155 0.75 +0.9 1,255,389 - Psest_1155 0.75 +1.0 1,255,389 - Psest_1155 0.75 -1.3 1,255,389 - Psest_1155 0.75 +0.5 1,255,486 + Psest_1155 0.81 -2.0 1,255,492 + Psest_1155 0.81 -0.5 1,255,492 + Psest_1155 0.81 -0.3 1,255,492 + Psest_1155 0.81 +0.9 1,255,492 + Psest_1155 0.81 -0.6 1,255,492 + Psest_1155 0.81 -0.3 1,255,492 + Psest_1155 0.81 +0.2 1,255,492 + Psest_1155 0.81 +0.4 1,255,493 - Psest_1155 0.81 +0.4 1,255,493 - Psest_1155 0.81 +1.5 1,255,695 + +0.6 1,255,808 + +0.6 1,255,809 - -0.1 1,255,809 - +0.9 1,255,809 - +0.3 1,255,877 + +1.4 1,255,878 - -1.0 1,255,878 - -1.3 1,255,888 + -0.7 1,255,888 + -1.5 1,255,888 + +1.2 1,255,888 + +2.2 1,255,889 - -0.4 1,255,889 - -1.6 1,255,889 - +1.2 1,255,889 - -1.2 1,256,088 + Psest_1156 0.19 -0.7 1,256,088 + Psest_1156 0.19 -0.9 1,256,151 - Psest_1156 0.25 +0.4 1,256,258 + Psest_1156 0.35 -0.9 1,256,259 - Psest_1156 0.35 -1.1 1,256,601 - Psest_1156 0.66 -1.0 1,256,601 - Psest_1156 0.66 -2.1 1,256,601 - Psest_1156 0.66 -0.3 1,256,601 - Psest_1156 0.66 -1.6 1,256,640 - Psest_1156 0.70 +1.5 1,256,640 - Psest_1156 0.70 -1.7 1,256,705 + Psest_1156 0.76 +0.3 1,256,705 + Psest_1156 0.76 +1.3 1,256,706 - Psest_1156 0.76 -0.5 1,256,706 - Psest_1156 0.76 -0.7 1,256,706 - Psest_1156 0.76 -0.9 1,256,754 - Psest_1156 0.80 -0.3 1,256,754 - Psest_1156 0.80 -0.5 1,257,067 + -1.9 1,257,068 - +1.5 1,257,316 + Psest_1157 0.32 -1.1 1,257,570 - Psest_1157 0.55 +0.4 1,257,610 + Psest_1157 0.59 -0.4 1,257,611 - Psest_1157 0.59 -0.3 1,257,611 - Psest_1157 0.59 -0.0 1,257,623 + Psest_1157 0.60 +0.2 1,257,624 - Psest_1157 0.60 -1.8 1,257,915 - Psest_1157 0.87 +0.9 1,257,916 + Psest_1157 0.88 -0.6 1,257,916 + Psest_1157 0.88 +0.7 1,257,916 + Psest_1157 0.88 -0.3 1,257,917 - Psest_1157 0.88 -1.3 1,257,917 - Psest_1157 0.88 +2.5 1,257,917 - Psest_1157 0.88 -0.7 1,257,930 + Psest_1157 0.89 -2.0 1,257,931 - Psest_1157 0.89 -0.2
Or see this region's nucleotide sequence