Experiment: Thallium(I) acetate 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4338 and Psest_4339 overlap by 1 nucleotides Psest_4339 and Psest_4340 are separated by 166 nucleotides Psest_4340 and Psest_4341 are separated by 52 nucleotides
Psest_4338: Psest_4338 - Fe2+-dicitrate sensor, membrane component, at 4,538,588 to 4,539,550
_4338
Psest_4339: Psest_4339 - DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog, at 4,539,550 to 4,540,065
_4339
Psest_4340: Psest_4340 - Protein of unknown function (DUF3617)., at 4,540,232 to 4,540,759
_4340
Psest_4341: Psest_4341 - hypothetical protein, at 4,540,812 to 4,541,174
_4341
Position (kb)
4539
4540
4541 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4538.757 kb on + strand, within Psest_4338 at 4538.758 kb on - strand, within Psest_4338 at 4538.936 kb on + strand, within Psest_4338 at 4538.936 kb on + strand, within Psest_4338 at 4538.936 kb on + strand, within Psest_4338 at 4538.936 kb on + strand, within Psest_4338 at 4538.937 kb on - strand, within Psest_4338 at 4538.937 kb on - strand, within Psest_4338 at 4538.937 kb on - strand, within Psest_4338 at 4538.937 kb on - strand, within Psest_4338 at 4538.937 kb on - strand, within Psest_4338 at 4538.937 kb on - strand, within Psest_4338 at 4538.937 kb on - strand, within Psest_4338 at 4538.937 kb on - strand, within Psest_4338 at 4538.937 kb on - strand, within Psest_4338 at 4538.964 kb on - strand, within Psest_4338 at 4538.964 kb on - strand, within Psest_4338 at 4538.964 kb on - strand, within Psest_4338 at 4538.964 kb on - strand, within Psest_4338 at 4539.105 kb on + strand, within Psest_4338 at 4539.106 kb on - strand, within Psest_4338 at 4539.537 kb on + strand at 4539.599 kb on + strand at 4539.599 kb on + strand at 4539.599 kb on + strand at 4539.599 kb on + strand at 4539.599 kb on + strand at 4539.599 kb on + strand at 4539.599 kb on + strand at 4539.599 kb on + strand at 4539.599 kb on + strand at 4539.599 kb on + strand at 4539.599 kb on + strand at 4539.599 kb on + strand at 4539.599 kb on + strand at 4539.599 kb on + strand at 4539.600 kb on - strand at 4539.600 kb on - strand at 4539.600 kb on - strand at 4539.600 kb on - strand at 4539.600 kb on - strand at 4539.600 kb on - strand at 4539.600 kb on - strand at 4539.600 kb on - strand at 4539.600 kb on - strand at 4539.600 kb on - strand at 4539.600 kb on - strand at 4539.600 kb on - strand at 4539.600 kb on - strand at 4539.600 kb on - strand at 4539.600 kb on - strand at 4539.650 kb on + strand, within Psest_4339 at 4539.650 kb on + strand, within Psest_4339 at 4539.650 kb on + strand, within Psest_4339 at 4539.650 kb on + strand, within Psest_4339 at 4539.650 kb on + strand, within Psest_4339 at 4539.650 kb on + strand, within Psest_4339 at 4539.651 kb on - strand, within Psest_4339 at 4539.651 kb on - strand, within Psest_4339 at 4539.809 kb on + strand, within Psest_4339 at 4539.809 kb on + strand, within Psest_4339 at 4539.810 kb on - strand, within Psest_4339 at 4539.875 kb on + strand, within Psest_4339 at 4539.875 kb on + strand, within Psest_4339 at 4539.936 kb on + strand, within Psest_4339 at 4539.936 kb on + strand, within Psest_4339 at 4539.937 kb on - strand, within Psest_4339 at 4539.937 kb on - strand, within Psest_4339 at 4540.020 kb on - strand at 4540.020 kb on - strand at 4540.050 kb on + strand at 4540.050 kb on + strand at 4540.050 kb on + strand at 4540.050 kb on + strand at 4540.051 kb on - strand at 4540.051 kb on - strand at 4540.453 kb on - strand, within Psest_4340 at 4540.572 kb on + strand, within Psest_4340 at 4540.627 kb on + strand, within Psest_4340 at 4540.627 kb on + strand, within Psest_4340 at 4540.651 kb on + strand, within Psest_4340 at 4540.657 kb on - strand, within Psest_4340 at 4540.657 kb on - strand, within Psest_4340 at 4540.814 kb on - strand at 4540.888 kb on + strand at 4540.888 kb on + strand, within Psest_4341 at 4540.888 kb on + strand, within Psest_4341 at 4540.888 kb on + strand, within Psest_4341 at 4540.891 kb on + strand, within Psest_4341 at 4540.891 kb on + strand, within Psest_4341 at 4540.892 kb on - strand, within Psest_4341 at 4540.892 kb on - strand, within Psest_4341 at 4540.892 kb on - strand, within Psest_4341 at 4540.892 kb on - strand, within Psest_4341
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.08 mg/ml remove 4,538,757 + Psest_4338 0.18 -1.2 4,538,758 - Psest_4338 0.18 -1.9 4,538,936 + Psest_4338 0.36 -0.2 4,538,936 + Psest_4338 0.36 +1.0 4,538,936 + Psest_4338 0.36 +1.8 4,538,936 + Psest_4338 0.36 +1.1 4,538,937 - Psest_4338 0.36 +0.3 4,538,937 - Psest_4338 0.36 -0.9 4,538,937 - Psest_4338 0.36 -0.5 4,538,937 - Psest_4338 0.36 -1.8 4,538,937 - Psest_4338 0.36 -0.0 4,538,937 - Psest_4338 0.36 -0.0 4,538,937 - Psest_4338 0.36 -0.6 4,538,937 - Psest_4338 0.36 +1.1 4,538,937 - Psest_4338 0.36 -0.2 4,538,964 - Psest_4338 0.39 -2.2 4,538,964 - Psest_4338 0.39 +2.3 4,538,964 - Psest_4338 0.39 -1.6 4,538,964 - Psest_4338 0.39 -1.2 4,539,105 + Psest_4338 0.54 +1.0 4,539,106 - Psest_4338 0.54 -1.9 4,539,537 + -1.3 4,539,599 + +1.3 4,539,599 + +2.1 4,539,599 + -0.7 4,539,599 + +0.8 4,539,599 + +1.0 4,539,599 + +1.8 4,539,599 + +0.4 4,539,599 + +2.0 4,539,599 + -1.3 4,539,599 + +3.3 4,539,599 + -1.2 4,539,599 + +0.5 4,539,599 + +1.6 4,539,599 + +2.4 4,539,600 - +0.6 4,539,600 - +0.5 4,539,600 - +0.2 4,539,600 - +2.6 4,539,600 - +0.5 4,539,600 - -1.0 4,539,600 - +1.3 4,539,600 - -0.5 4,539,600 - +0.0 4,539,600 - +1.8 4,539,600 - -0.9 4,539,600 - +0.4 4,539,600 - -1.4 4,539,600 - +1.4 4,539,600 - +0.8 4,539,650 + Psest_4339 0.19 -0.0 4,539,650 + Psest_4339 0.19 +1.4 4,539,650 + Psest_4339 0.19 +0.3 4,539,650 + Psest_4339 0.19 -1.1 4,539,650 + Psest_4339 0.19 +0.5 4,539,650 + Psest_4339 0.19 -1.3 4,539,651 - Psest_4339 0.20 +2.9 4,539,651 - Psest_4339 0.20 +0.8 4,539,809 + Psest_4339 0.50 -1.4 4,539,809 + Psest_4339 0.50 +0.7 4,539,810 - Psest_4339 0.50 +1.2 4,539,875 + Psest_4339 0.63 -1.3 4,539,875 + Psest_4339 0.63 +1.3 4,539,936 + Psest_4339 0.75 +0.3 4,539,936 + Psest_4339 0.75 +1.4 4,539,937 - Psest_4339 0.75 +3.7 4,539,937 - Psest_4339 0.75 +0.6 4,540,020 - +0.6 4,540,020 - +1.4 4,540,050 + +0.9 4,540,050 + +1.1 4,540,050 + +1.5 4,540,050 + +0.3 4,540,051 - -1.9 4,540,051 - +0.3 4,540,453 - Psest_4340 0.42 +0.8 4,540,572 + Psest_4340 0.64 -1.4 4,540,627 + Psest_4340 0.75 -1.0 4,540,627 + Psest_4340 0.75 +0.1 4,540,651 + Psest_4340 0.79 +0.4 4,540,657 - Psest_4340 0.80 -0.0 4,540,657 - Psest_4340 0.80 -0.1 4,540,814 - -1.8 4,540,888 + -0.5 4,540,888 + Psest_4341 0.21 +0.5 4,540,888 + Psest_4341 0.21 -0.0 4,540,888 + Psest_4341 0.21 +0.4 4,540,891 + Psest_4341 0.22 -2.3 4,540,891 + Psest_4341 0.22 +1.2 4,540,892 - Psest_4341 0.22 +0.4 4,540,892 - Psest_4341 0.22 -1.4 4,540,892 - Psest_4341 0.22 +2.3 4,540,892 - Psest_4341 0.22 +1.7
Or see this region's nucleotide sequence