Experiment: Thallium(I) acetate 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3808 and Psest_3809 are separated by 201 nucleotides Psest_3809 and Psest_3810 are separated by 20 nucleotides Psest_3810 and Psest_3811 are separated by 85 nucleotides Psest_3811 and Psest_3812 are separated by 70 nucleotides
Psest_3808: Psest_3808 - Protein of unknown function (DUF3360)., at 3,979,360 to 3,980,835
_3808
Psest_3809: Psest_3809 - hypothetical protein, at 3,981,037 to 3,981,630
_3809
Psest_3810: Psest_3810 - orotate phosphoribosyltransferase, at 3,981,651 to 3,982,292
_3810
Psest_3811: Psest_3811 - exodeoxyribonuclease III (xth), at 3,982,378 to 3,983,157
_3811
Psest_3812: Psest_3812 - Uncharacterized protein conserved in bacteria, at 3,983,228 to 3,983,596
_3812
Position (kb)
3981
3982
3983 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3980.697 kb on - strand at 3980.716 kb on + strand at 3980.717 kb on - strand at 3980.717 kb on - strand at 3980.762 kb on + strand at 3980.811 kb on - strand at 3980.811 kb on - strand at 3980.818 kb on + strand at 3980.818 kb on + strand at 3980.819 kb on - strand at 3980.819 kb on - strand at 3980.838 kb on + strand at 3980.839 kb on - strand at 3980.909 kb on + strand at 3980.918 kb on - strand at 3980.935 kb on - strand at 3980.946 kb on + strand at 3980.946 kb on + strand at 3980.946 kb on + strand at 3980.954 kb on - strand at 3980.954 kb on - strand at 3981.003 kb on + strand at 3981.003 kb on + strand at 3981.003 kb on + strand at 3981.003 kb on + strand at 3981.003 kb on + strand at 3981.003 kb on + strand at 3981.004 kb on - strand at 3981.004 kb on - strand at 3981.015 kb on + strand at 3981.015 kb on + strand at 3981.015 kb on + strand at 3981.015 kb on + strand at 3981.055 kb on + strand at 3981.055 kb on + strand at 3981.055 kb on + strand at 3981.055 kb on + strand at 3981.055 kb on + strand at 3981.055 kb on + strand at 3981.056 kb on - strand at 3981.056 kb on - strand at 3981.056 kb on - strand at 3981.091 kb on + strand at 3981.091 kb on + strand at 3981.092 kb on - strand at 3981.169 kb on + strand, within Psest_3809 at 3981.331 kb on + strand, within Psest_3809 at 3981.331 kb on + strand, within Psest_3809 at 3981.332 kb on - strand, within Psest_3809 at 3981.332 kb on - strand, within Psest_3809 at 3981.332 kb on - strand, within Psest_3809 at 3981.332 kb on - strand, within Psest_3809 at 3981.350 kb on + strand, within Psest_3809 at 3981.350 kb on + strand, within Psest_3809 at 3981.350 kb on + strand, within Psest_3809 at 3981.351 kb on - strand, within Psest_3809 at 3981.351 kb on - strand, within Psest_3809 at 3981.489 kb on + strand, within Psest_3809 at 3981.490 kb on - strand, within Psest_3809 at 3981.490 kb on - strand, within Psest_3809 at 3981.490 kb on - strand, within Psest_3809 at 3981.490 kb on - strand, within Psest_3809 at 3981.552 kb on - strand, within Psest_3809 at 3981.552 kb on - strand, within Psest_3809 at 3981.552 kb on - strand, within Psest_3809 at 3981.624 kb on + strand at 3981.625 kb on - strand at 3981.625 kb on - strand at 3981.638 kb on + strand at 3981.638 kb on + strand at 3981.639 kb on - strand at 3981.639 kb on - strand at 3981.639 kb on - strand at 3981.642 kb on + strand at 3981.642 kb on + strand at 3981.643 kb on - strand at 3981.643 kb on - strand at 3981.643 kb on - strand at 3981.643 kb on - strand at 3981.643 kb on - strand at 3981.647 kb on + strand at 3981.647 kb on + strand at 3981.647 kb on + strand at 3981.648 kb on - strand at 3981.648 kb on - strand at 3981.648 kb on - strand at 3981.648 kb on - strand at 3981.695 kb on - strand at 3981.725 kb on - strand, within Psest_3810 at 3981.733 kb on - strand, within Psest_3810 at 3981.733 kb on - strand, within Psest_3810 at 3982.079 kb on - strand, within Psest_3810 at 3982.079 kb on - strand, within Psest_3810 at 3982.136 kb on - strand, within Psest_3810 at 3982.321 kb on + strand at 3982.325 kb on + strand at 3982.326 kb on - strand at 3982.350 kb on + strand at 3982.350 kb on + strand at 3983.229 kb on + strand at 3983.229 kb on + strand at 3983.230 kb on - strand at 3983.230 kb on - strand at 3983.230 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.08 mg/ml remove 3,980,697 - +1.4 3,980,716 + -1.5 3,980,717 - +0.1 3,980,717 - +0.3 3,980,762 + +2.2 3,980,811 - -0.8 3,980,811 - -1.0 3,980,818 + -0.6 3,980,818 + +2.0 3,980,819 - +0.4 3,980,819 - +0.1 3,980,838 + -0.7 3,980,839 - -0.9 3,980,909 + -1.3 3,980,918 - +0.4 3,980,935 - -1.4 3,980,946 + +0.1 3,980,946 + +1.2 3,980,946 + -0.3 3,980,954 - +2.0 3,980,954 - +0.1 3,981,003 + -1.5 3,981,003 + +0.4 3,981,003 + +0.6 3,981,003 + -1.6 3,981,003 + +0.4 3,981,003 + -1.0 3,981,004 - -0.1 3,981,004 - -1.5 3,981,015 + +0.3 3,981,015 + -1.9 3,981,015 + +1.2 3,981,015 + -0.2 3,981,055 + +1.0 3,981,055 + +1.2 3,981,055 + -0.6 3,981,055 + -0.8 3,981,055 + +0.9 3,981,055 + -0.8 3,981,056 - -1.0 3,981,056 - -0.1 3,981,056 - +2.2 3,981,091 + +2.0 3,981,091 + -0.2 3,981,092 - -1.9 3,981,169 + Psest_3809 0.22 -0.3 3,981,331 + Psest_3809 0.49 -0.9 3,981,331 + Psest_3809 0.49 +0.7 3,981,332 - Psest_3809 0.50 +0.0 3,981,332 - Psest_3809 0.50 +0.7 3,981,332 - Psest_3809 0.50 +3.4 3,981,332 - Psest_3809 0.50 -1.2 3,981,350 + Psest_3809 0.53 -2.2 3,981,350 + Psest_3809 0.53 +1.2 3,981,350 + Psest_3809 0.53 -0.8 3,981,351 - Psest_3809 0.53 -1.4 3,981,351 - Psest_3809 0.53 +0.4 3,981,489 + Psest_3809 0.76 -1.4 3,981,490 - Psest_3809 0.76 -0.6 3,981,490 - Psest_3809 0.76 -0.6 3,981,490 - Psest_3809 0.76 +0.9 3,981,490 - Psest_3809 0.76 -1.7 3,981,552 - Psest_3809 0.87 -0.6 3,981,552 - Psest_3809 0.87 +1.3 3,981,552 - Psest_3809 0.87 -0.7 3,981,624 + +0.1 3,981,625 - -0.4 3,981,625 - +0.2 3,981,638 + +0.8 3,981,638 + -0.4 3,981,639 - -0.4 3,981,639 - +0.6 3,981,639 - +1.4 3,981,642 + -1.6 3,981,642 + -2.7 3,981,643 - -0.3 3,981,643 - -0.5 3,981,643 - -1.9 3,981,643 - +1.0 3,981,643 - -0.6 3,981,647 + +1.4 3,981,647 + +0.4 3,981,647 + -1.7 3,981,648 - +1.8 3,981,648 - +1.5 3,981,648 - -0.8 3,981,648 - -0.0 3,981,695 - -0.9 3,981,725 - Psest_3810 0.12 -0.6 3,981,733 - Psest_3810 0.13 +2.2 3,981,733 - Psest_3810 0.13 +1.2 3,982,079 - Psest_3810 0.67 +0.6 3,982,079 - Psest_3810 0.67 +0.2 3,982,136 - Psest_3810 0.76 +1.2 3,982,321 + -0.6 3,982,325 + +1.2 3,982,326 - -1.2 3,982,350 + -0.5 3,982,350 + +1.6 3,983,229 + -1.9 3,983,229 + +0.1 3,983,230 - +0.4 3,983,230 - +0.2 3,983,230 - +2.0
Or see this region's nucleotide sequence