Experiment: Thallium(I) acetate 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2567 and Psest_2569 are separated by 520 nucleotides Psest_2569 and Psest_2570 are separated by 3 nucleotides
Psest_2567: Psest_2567 - PEP phosphonomutase and related enzymes, at 2,749,434 to 2,750,270
_2567
Psest_2569: Psest_2569 - Transcriptional regulator, at 2,750,791 to 2,751,705
_2569
Psest_2570: Psest_2570 - Transcriptional regulator, at 2,751,709 to 2,752,617
_2570
Position (kb)
2750
2751
2752 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2749.839 kb on + strand, within Psest_2567 at 2749.840 kb on - strand, within Psest_2567 at 2749.882 kb on + strand, within Psest_2567 at 2749.883 kb on - strand, within Psest_2567 at 2749.983 kb on + strand, within Psest_2567 at 2749.984 kb on - strand, within Psest_2567 at 2749.984 kb on - strand, within Psest_2567 at 2749.984 kb on - strand, within Psest_2567 at 2750.111 kb on - strand, within Psest_2567 at 2750.125 kb on + strand, within Psest_2567 at 2750.125 kb on + strand, within Psest_2567 at 2750.126 kb on - strand, within Psest_2567 at 2750.126 kb on - strand, within Psest_2567 at 2750.126 kb on - strand, within Psest_2567 at 2750.165 kb on - strand, within Psest_2567 at 2750.338 kb on + strand at 2750.496 kb on - strand at 2750.497 kb on + strand at 2750.497 kb on + strand at 2750.497 kb on + strand at 2750.497 kb on + strand at 2750.497 kb on + strand at 2750.498 kb on - strand at 2750.498 kb on - strand at 2750.498 kb on - strand at 2750.498 kb on - strand at 2750.498 kb on - strand at 2750.498 kb on - strand at 2750.498 kb on - strand at 2750.498 kb on - strand at 2750.498 kb on - strand at 2750.498 kb on - strand at 2750.542 kb on + strand at 2750.542 kb on + strand at 2750.542 kb on + strand at 2750.542 kb on + strand at 2750.542 kb on + strand at 2750.542 kb on + strand at 2750.543 kb on - strand at 2750.543 kb on - strand at 2750.543 kb on - strand at 2750.545 kb on + strand at 2750.545 kb on + strand at 2750.545 kb on + strand at 2750.545 kb on + strand at 2750.545 kb on + strand at 2750.546 kb on - strand at 2750.546 kb on - strand at 2750.546 kb on - strand at 2750.546 kb on - strand at 2750.546 kb on - strand at 2750.546 kb on - strand at 2750.546 kb on - strand at 2750.546 kb on - strand at 2750.546 kb on - strand at 2750.570 kb on - strand at 2750.570 kb on - strand at 2750.570 kb on - strand at 2750.579 kb on + strand at 2750.579 kb on + strand at 2750.580 kb on - strand at 2750.723 kb on + strand at 2750.819 kb on + strand at 2750.872 kb on - strand at 2750.872 kb on - strand at 2750.872 kb on - strand at 2750.872 kb on - strand at 2751.042 kb on + strand, within Psest_2569 at 2751.131 kb on - strand, within Psest_2569 at 2751.131 kb on - strand, within Psest_2569 at 2751.170 kb on + strand, within Psest_2569 at 2751.270 kb on + strand, within Psest_2569 at 2751.270 kb on + strand, within Psest_2569 at 2751.270 kb on + strand, within Psest_2569 at 2751.271 kb on - strand, within Psest_2569 at 2751.271 kb on - strand, within Psest_2569 at 2751.506 kb on + strand, within Psest_2569 at 2751.507 kb on - strand, within Psest_2569 at 2751.515 kb on - strand, within Psest_2569 at 2751.515 kb on - strand, within Psest_2569 at 2751.576 kb on + strand, within Psest_2569 at 2751.577 kb on - strand, within Psest_2569 at 2751.577 kb on - strand, within Psest_2569 at 2751.591 kb on - strand, within Psest_2569 at 2751.591 kb on - strand, within Psest_2569 at 2751.602 kb on - strand, within Psest_2569 at 2751.613 kb on - strand, within Psest_2569 at 2751.703 kb on + strand at 2751.704 kb on - strand at 2751.704 kb on - strand at 2751.720 kb on + strand at 2751.720 kb on + strand at 2751.721 kb on - strand at 2751.728 kb on + strand at 2751.728 kb on + strand at 2751.729 kb on - strand at 2751.729 kb on - strand at 2751.965 kb on + strand, within Psest_2570 at 2751.965 kb on + strand, within Psest_2570 at 2751.965 kb on + strand, within Psest_2570 at 2751.966 kb on - strand, within Psest_2570 at 2751.966 kb on - strand, within Psest_2570 at 2751.966 kb on - strand, within Psest_2570 at 2752.026 kb on - strand, within Psest_2570 at 2752.048 kb on + strand, within Psest_2570 at 2752.344 kb on - strand, within Psest_2570 at 2752.648 kb on + strand at 2752.649 kb on - strand at 2752.649 kb on - strand at 2752.649 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.08 mg/ml remove 2,749,839 + Psest_2567 0.48 +0.3 2,749,840 - Psest_2567 0.49 +0.4 2,749,882 + Psest_2567 0.54 -0.5 2,749,883 - Psest_2567 0.54 +0.8 2,749,983 + Psest_2567 0.66 +1.3 2,749,984 - Psest_2567 0.66 +0.3 2,749,984 - Psest_2567 0.66 -0.7 2,749,984 - Psest_2567 0.66 +0.5 2,750,111 - Psest_2567 0.81 -0.2 2,750,125 + Psest_2567 0.83 +0.4 2,750,125 + Psest_2567 0.83 +0.4 2,750,126 - Psest_2567 0.83 -1.7 2,750,126 - Psest_2567 0.83 +1.5 2,750,126 - Psest_2567 0.83 -0.6 2,750,165 - Psest_2567 0.87 -0.4 2,750,338 + +2.1 2,750,496 - +1.7 2,750,497 + +0.1 2,750,497 + +0.4 2,750,497 + +0.0 2,750,497 + -1.4 2,750,497 + -2.9 2,750,498 - -0.1 2,750,498 - +1.2 2,750,498 - +0.5 2,750,498 - -0.7 2,750,498 - -2.7 2,750,498 - +0.0 2,750,498 - -1.4 2,750,498 - -1.2 2,750,498 - -0.8 2,750,498 - +1.6 2,750,542 + -0.4 2,750,542 + -0.7 2,750,542 + +0.9 2,750,542 + -0.0 2,750,542 + +0.6 2,750,542 + +0.0 2,750,543 - -0.8 2,750,543 - +0.7 2,750,543 - -2.2 2,750,545 + -0.2 2,750,545 + +0.1 2,750,545 + -1.0 2,750,545 + -0.8 2,750,545 + -0.1 2,750,546 - +0.9 2,750,546 - -0.3 2,750,546 - -1.7 2,750,546 - -1.4 2,750,546 - -0.1 2,750,546 - -0.2 2,750,546 - +2.1 2,750,546 - +0.2 2,750,546 - +1.4 2,750,570 - -0.3 2,750,570 - -0.3 2,750,570 - +0.4 2,750,579 + +0.3 2,750,579 + +0.5 2,750,580 - -0.2 2,750,723 + +0.7 2,750,819 + -0.1 2,750,872 - -0.0 2,750,872 - -1.4 2,750,872 - -1.2 2,750,872 - +1.0 2,751,042 + Psest_2569 0.27 -0.8 2,751,131 - Psest_2569 0.37 -0.9 2,751,131 - Psest_2569 0.37 -0.4 2,751,170 + Psest_2569 0.41 -0.5 2,751,270 + Psest_2569 0.52 +0.0 2,751,270 + Psest_2569 0.52 -1.1 2,751,270 + Psest_2569 0.52 -1.0 2,751,271 - Psest_2569 0.52 -0.6 2,751,271 - Psest_2569 0.52 -1.2 2,751,506 + Psest_2569 0.78 -1.1 2,751,507 - Psest_2569 0.78 -0.6 2,751,515 - Psest_2569 0.79 -0.1 2,751,515 - Psest_2569 0.79 +1.2 2,751,576 + Psest_2569 0.86 +0.4 2,751,577 - Psest_2569 0.86 -2.2 2,751,577 - Psest_2569 0.86 +0.5 2,751,591 - Psest_2569 0.87 -0.6 2,751,591 - Psest_2569 0.87 +0.6 2,751,602 - Psest_2569 0.89 +1.3 2,751,613 - Psest_2569 0.90 -0.9 2,751,703 + -0.5 2,751,704 - +1.6 2,751,704 - -1.1 2,751,720 + +0.0 2,751,720 + +1.1 2,751,721 - +0.3 2,751,728 + +0.2 2,751,728 + -0.6 2,751,729 - +2.1 2,751,729 - +1.3 2,751,965 + Psest_2570 0.28 -0.2 2,751,965 + Psest_2570 0.28 +1.0 2,751,965 + Psest_2570 0.28 +1.1 2,751,966 - Psest_2570 0.28 +0.5 2,751,966 - Psest_2570 0.28 -1.3 2,751,966 - Psest_2570 0.28 +0.3 2,752,026 - Psest_2570 0.35 +1.0 2,752,048 + Psest_2570 0.37 -0.8 2,752,344 - Psest_2570 0.70 +0.8 2,752,648 + -0.3 2,752,649 - -1.2 2,752,649 - -0.1 2,752,649 - +0.5
Or see this region's nucleotide sequence