Experiment: Thallium(I) acetate 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1065 and Psest_1066 are separated by 226 nucleotides Psest_1066 and Psest_1067 are separated by 171 nucleotides Psest_1067 and Psest_1068 are separated by 124 nucleotides Psest_1068 and Psest_1069 are separated by 274 nucleotides
Psest_1065: Psest_1065 - hypothetical protein, at 1,153,563 to 1,153,844
_1065
Psest_1066: Psest_1066 - hypothetical protein, at 1,154,071 to 1,154,280
_1066
Psest_1067: Psest_1067 - hypothetical protein, at 1,154,452 to 1,154,613
_1067
Psest_1068: Psest_1068 - outer membrane porin, OprD family., at 1,154,738 to 1,156,000
_1068
Psest_1069: Psest_1069 - Protease II, at 1,156,275 to 1,158,104
_1069
Position (kb)
1154
1155
1156
1157 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1153.882 kb on + strand at 1153.883 kb on - strand at 1153.977 kb on + strand at 1153.977 kb on + strand at 1153.977 kb on + strand at 1153.978 kb on - strand at 1153.991 kb on + strand at 1153.992 kb on - strand at 1154.042 kb on - strand at 1154.042 kb on - strand at 1154.135 kb on - strand, within Psest_1066 at 1154.348 kb on + strand at 1154.348 kb on + strand at 1154.348 kb on + strand at 1154.352 kb on + strand at 1154.440 kb on + strand at 1154.441 kb on - strand at 1154.457 kb on + strand at 1154.457 kb on + strand at 1154.457 kb on + strand at 1154.457 kb on + strand at 1154.457 kb on + strand at 1154.457 kb on + strand at 1154.457 kb on + strand at 1154.457 kb on + strand at 1154.457 kb on + strand at 1154.457 kb on + strand at 1154.457 kb on + strand at 1154.458 kb on - strand at 1154.458 kb on - strand at 1154.458 kb on - strand at 1154.458 kb on - strand at 1154.458 kb on - strand at 1154.465 kb on + strand at 1154.465 kb on + strand at 1154.465 kb on + strand at 1154.465 kb on + strand at 1154.465 kb on + strand at 1154.465 kb on + strand at 1154.490 kb on + strand, within Psest_1067 at 1154.490 kb on + strand, within Psest_1067 at 1154.490 kb on + strand, within Psest_1067 at 1154.490 kb on + strand, within Psest_1067 at 1154.490 kb on + strand, within Psest_1067 at 1154.491 kb on - strand, within Psest_1067 at 1154.491 kb on - strand, within Psest_1067 at 1154.532 kb on + strand, within Psest_1067 at 1154.560 kb on + strand, within Psest_1067 at 1154.866 kb on - strand, within Psest_1068 at 1155.084 kb on + strand, within Psest_1068 at 1155.084 kb on + strand, within Psest_1068 at 1155.084 kb on + strand, within Psest_1068 at 1155.085 kb on - strand, within Psest_1068 at 1155.150 kb on + strand, within Psest_1068 at 1155.150 kb on + strand, within Psest_1068 at 1155.151 kb on - strand, within Psest_1068 at 1155.151 kb on - strand, within Psest_1068 at 1155.151 kb on - strand, within Psest_1068 at 1155.291 kb on + strand, within Psest_1068 at 1155.291 kb on + strand, within Psest_1068 at 1155.291 kb on + strand, within Psest_1068 at 1155.291 kb on + strand, within Psest_1068 at 1155.291 kb on + strand, within Psest_1068 at 1155.291 kb on + strand, within Psest_1068 at 1155.291 kb on + strand, within Psest_1068 at 1155.291 kb on + strand, within Psest_1068 at 1155.292 kb on - strand, within Psest_1068 at 1155.292 kb on - strand, within Psest_1068 at 1155.292 kb on - strand, within Psest_1068 at 1155.292 kb on - strand, within Psest_1068 at 1155.292 kb on - strand, within Psest_1068 at 1155.315 kb on + strand, within Psest_1068 at 1155.318 kb on + strand, within Psest_1068 at 1155.318 kb on + strand, within Psest_1068 at 1155.319 kb on - strand, within Psest_1068 at 1155.319 kb on - strand, within Psest_1068 at 1155.319 kb on - strand, within Psest_1068 at 1155.319 kb on - strand, within Psest_1068 at 1155.600 kb on - strand, within Psest_1068 at 1155.600 kb on - strand, within Psest_1068 at 1155.600 kb on - strand, within Psest_1068 at 1155.600 kb on - strand, within Psest_1068 at 1155.600 kb on - strand, within Psest_1068 at 1155.876 kb on + strand at 1155.876 kb on + strand at 1155.876 kb on + strand at 1155.876 kb on + strand at 1155.877 kb on - strand at 1156.003 kb on + strand at 1156.003 kb on + strand at 1156.003 kb on + strand at 1156.003 kb on + strand at 1156.004 kb on - strand at 1156.004 kb on - strand at 1156.181 kb on + strand at 1156.181 kb on + strand at 1156.181 kb on + strand at 1156.181 kb on + strand at 1156.181 kb on + strand at 1156.182 kb on - strand at 1156.182 kb on - strand at 1156.182 kb on - strand at 1156.182 kb on - strand at 1156.182 kb on - strand at 1156.182 kb on - strand at 1156.299 kb on + strand at 1156.299 kb on + strand at 1156.345 kb on + strand at 1156.345 kb on + strand at 1156.345 kb on + strand at 1156.346 kb on - strand at 1156.346 kb on - strand at 1156.346 kb on - strand at 1156.525 kb on + strand, within Psest_1069 at 1156.525 kb on + strand, within Psest_1069 at 1156.525 kb on + strand, within Psest_1069 at 1156.582 kb on + strand, within Psest_1069 at 1156.583 kb on - strand, within Psest_1069 at 1156.583 kb on - strand, within Psest_1069 at 1156.585 kb on + strand, within Psest_1069 at 1156.586 kb on - strand, within Psest_1069 at 1156.625 kb on + strand, within Psest_1069 at 1156.686 kb on + strand, within Psest_1069 at 1156.687 kb on - strand, within Psest_1069
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.08 mg/ml remove 1,153,882 + -0.3 1,153,883 - -0.2 1,153,977 + +1.2 1,153,977 + -0.2 1,153,977 + -1.1 1,153,978 - -0.4 1,153,991 + +1.5 1,153,992 - +0.5 1,154,042 - +0.1 1,154,042 - +0.2 1,154,135 - Psest_1066 0.30 +0.9 1,154,348 + +1.3 1,154,348 + -1.6 1,154,348 + +0.6 1,154,352 + -0.6 1,154,440 + +1.6 1,154,441 - -1.4 1,154,457 + -0.9 1,154,457 + -0.5 1,154,457 + -1.6 1,154,457 + -0.4 1,154,457 + +0.2 1,154,457 + +1.2 1,154,457 + -0.0 1,154,457 + +0.8 1,154,457 + +1.1 1,154,457 + -1.1 1,154,457 + +0.6 1,154,458 - +2.0 1,154,458 - +1.1 1,154,458 - -0.0 1,154,458 - +1.1 1,154,458 - -1.8 1,154,465 + +2.2 1,154,465 + -0.5 1,154,465 + -0.8 1,154,465 + -0.5 1,154,465 + +2.0 1,154,465 + -0.1 1,154,490 + Psest_1067 0.23 -0.3 1,154,490 + Psest_1067 0.23 -0.5 1,154,490 + Psest_1067 0.23 -0.6 1,154,490 + Psest_1067 0.23 -3.0 1,154,490 + Psest_1067 0.23 +0.2 1,154,491 - Psest_1067 0.24 +0.3 1,154,491 - Psest_1067 0.24 +0.1 1,154,532 + Psest_1067 0.49 +0.0 1,154,560 + Psest_1067 0.67 -0.3 1,154,866 - Psest_1068 0.10 -1.3 1,155,084 + Psest_1068 0.27 -2.1 1,155,084 + Psest_1068 0.27 +1.7 1,155,084 + Psest_1068 0.27 +1.4 1,155,085 - Psest_1068 0.27 -1.4 1,155,150 + Psest_1068 0.33 -0.1 1,155,150 + Psest_1068 0.33 +0.1 1,155,151 - Psest_1068 0.33 -1.4 1,155,151 - Psest_1068 0.33 -0.0 1,155,151 - Psest_1068 0.33 +2.0 1,155,291 + Psest_1068 0.44 +1.2 1,155,291 + Psest_1068 0.44 -1.1 1,155,291 + Psest_1068 0.44 +1.9 1,155,291 + Psest_1068 0.44 +0.2 1,155,291 + Psest_1068 0.44 +1.4 1,155,291 + Psest_1068 0.44 -2.5 1,155,291 + Psest_1068 0.44 +1.2 1,155,291 + Psest_1068 0.44 +1.4 1,155,292 - Psest_1068 0.44 +0.4 1,155,292 - Psest_1068 0.44 +0.4 1,155,292 - Psest_1068 0.44 +1.5 1,155,292 - Psest_1068 0.44 -1.4 1,155,292 - Psest_1068 0.44 +1.2 1,155,315 + Psest_1068 0.46 +0.0 1,155,318 + Psest_1068 0.46 -0.1 1,155,318 + Psest_1068 0.46 +0.3 1,155,319 - Psest_1068 0.46 +3.0 1,155,319 - Psest_1068 0.46 -0.3 1,155,319 - Psest_1068 0.46 -0.4 1,155,319 - Psest_1068 0.46 +1.2 1,155,600 - Psest_1068 0.68 +1.2 1,155,600 - Psest_1068 0.68 +1.4 1,155,600 - Psest_1068 0.68 +0.3 1,155,600 - Psest_1068 0.68 +1.7 1,155,600 - Psest_1068 0.68 +0.5 1,155,876 + +1.1 1,155,876 + -0.2 1,155,876 + +1.0 1,155,876 + +0.1 1,155,877 - +0.7 1,156,003 + +1.3 1,156,003 + -0.8 1,156,003 + -2.3 1,156,003 + +0.2 1,156,004 - +1.9 1,156,004 - +0.1 1,156,181 + +0.2 1,156,181 + -1.2 1,156,181 + +0.4 1,156,181 + -1.2 1,156,181 + +0.6 1,156,182 - +0.1 1,156,182 - -0.2 1,156,182 - +0.2 1,156,182 - -1.2 1,156,182 - -1.8 1,156,182 - +0.5 1,156,299 + +1.4 1,156,299 + +0.0 1,156,345 + +2.1 1,156,345 + -1.2 1,156,345 + -1.8 1,156,346 - +0.3 1,156,346 - -0.8 1,156,346 - -0.1 1,156,525 + Psest_1069 0.14 +0.6 1,156,525 + Psest_1069 0.14 -1.2 1,156,525 + Psest_1069 0.14 -1.8 1,156,582 + Psest_1069 0.17 +0.5 1,156,583 - Psest_1069 0.17 +1.5 1,156,583 - Psest_1069 0.17 +1.5 1,156,585 + Psest_1069 0.17 -0.5 1,156,586 - Psest_1069 0.17 -0.1 1,156,625 + Psest_1069 0.19 -0.5 1,156,686 + Psest_1069 0.22 +0.2 1,156,687 - Psest_1069 0.23 -1.1
Or see this region's nucleotide sequence