Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS19825

Experiment: 4-Hydroxyphenylpropionic (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxyphenylpropionic (C) 5 mM
4,485,828	+		PFLU_RS19820	0.22	-0.3
4,485,828	+		PFLU_RS19820	0.22	-1.0
4,485,829	-		PFLU_RS19820	0.22	-0.8
4,485,829	-		PFLU_RS19820	0.22	-0.6
4,485,829	-		PFLU_RS19820	0.22	-0.4
4,485,845	-		PFLU_RS19820	0.24	-0.5
4,485,845	-		PFLU_RS19820	0.24	+0.9
4,486,241	+		PFLU_RS19820	0.71	+0.1
4,486,241	+		PFLU_RS19820	0.71	+0.4
4,486,242	-		PFLU_RS19820	0.71	+0.7
4,486,242	-		PFLU_RS19820	0.71	+0.4
4,486,482	+				-0.5
4,486,613	-				+0.6
4,486,613	-				+0.2
4,486,667	+				-0.0
4,486,750	-				-0.6
4,486,750	-				+1.4
4,486,834	+				-0.4
4,486,871	+				+1.5
4,486,872	-				-0.1
4,486,945	-				+0.8
4,487,928	-		PFLU_RS19825	0.76	+0.7
4,487,928	-		PFLU_RS19825	0.76	-0.1
4,487,928	-		PFLU_RS19825	0.76	+2.0
4,487,928	-		PFLU_RS19825	0.76	-0.6
4,487,988	+		PFLU_RS19825	0.80	+0.1
4,487,989	-		PFLU_RS19825	0.80	+0.3
4,488,010	+		PFLU_RS19825	0.82	+0.6
4,488,010	+		PFLU_RS19825	0.82	+1.0
4,488,010	+		PFLU_RS19825	0.82	+2.7
4,488,011	-		PFLU_RS19825	0.82	+0.8
4,488,011	-		PFLU_RS19825	0.82	+0.7
4,488,011	-		PFLU_RS19825	0.82	-2.5
4,488,018	-		PFLU_RS19825	0.82	-1.7
4,488,062	+		PFLU_RS19825	0.85	+0.7
4,488,063	-		PFLU_RS19825	0.85	-1.4
4,488,063	-		PFLU_RS19825	0.85	+0.3
4,488,124	+		PFLU_RS19825	0.89	-1.6
4,488,125	-		PFLU_RS19825	0.90	-1.0
4,488,125	-		PFLU_RS19825	0.90	+1.2
4,488,126	+		PFLU_RS19825	0.90	-1.0
4,488,188	+				+0.2
4,488,239	+				-0.4
4,488,239	+				+0.8
4,488,239	+				-0.7
4,488,239	+				+0.6
4,488,240	-				+0.7
4,488,240	-				+1.1
4,488,250	+				+0.6
4,488,290	+				-0.7
4,488,290	+				-1.7
4,488,290	+				-1.6
4,488,290	+				-0.4
4,488,291	-				-1.4
4,488,291	-				-0.3
4,488,291	-				+0.8
4,488,291	-				+0.4
4,488,335	+				+2.4
4,488,335	+				+2.4
4,488,335	+				-0.3
4,488,335	+				+0.7
4,488,335	+				-1.7
4,488,335	+				-0.0
4,488,335	+				+0.5
4,488,336	-				+2.0
4,488,336	-				-1.0
4,488,336	-				-0.1
4,488,336	-				-0.3
4,488,336	-				+1.0
4,488,336	-				-0.1
4,488,336	-				-3.3
4,488,336	-				+0.1
4,488,344	+				+0.2
4,488,344	+				-1.3
4,488,368	+				-0.1
4,488,369	-				-0.9
4,488,369	-				+1.4
4,488,369	-				-0.6
4,488,372	+				-0.6
4,488,372	+				+0.6
4,488,372	+				+0.0
4,488,373	-				+0.4
4,488,383	+				-0.0
4,488,475	+				-0.8
4,488,490	+				-1.4
4,488,493	+				-1.0
4,488,493	+				+0.7
4,488,494	-				-0.1
4,488,494	-				-3.1
4,488,494	-				+1.4
4,488,494	-				-1.1
4,488,494	-				+0.4
4,488,494	-				-1.6
4,488,574	+		PFLU_RS19830	0.17	+1.9
4,488,574	+		PFLU_RS19830	0.17	+0.4
4,488,575	-		PFLU_RS19830	0.17	-0.1
4,488,575	-		PFLU_RS19830	0.17	-0.6
4,488,575	-		PFLU_RS19830	0.17	+0.6
4,488,616	+		PFLU_RS19830	0.25	+0.7
4,488,632	+		PFLU_RS19830	0.29	+0.1
4,488,691	+		PFLU_RS19830	0.41	-0.4
4,488,792	-		PFLU_RS19830	0.61	+0.0
4,488,968	+				-1.1
4,488,968	+				-0.6
4,488,968	+				-2.4
4,488,969	-				+1.2
4,489,110	+				+0.1
4,489,111	-				+0.3
4,489,132	-				-0.0
4,489,162	+				-0.4
4,489,162	+				-0.7
4,489,163	-				+0.9
4,489,186	-				+0.1