Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11390

Experiment: 4-Hydroxyphenylpropionic (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxyphenylpropionic (C) 5 mM
2,525,444	+		PFLU_RS11385	0.33	+0.6
2,525,445	-		PFLU_RS11385	0.33	+1.4
2,525,445	-		PFLU_RS11385	0.33	-0.2
2,525,445	-		PFLU_RS11385	0.33	+0.3
2,525,445	-		PFLU_RS11385	0.33	+0.1
2,525,467	+		PFLU_RS11385	0.35	-1.1
2,525,468	-		PFLU_RS11385	0.35	-0.3
2,525,468	-		PFLU_RS11385	0.35	-1.1
2,525,808	+		PFLU_RS11385	0.62	+1.6
2,525,951	+		PFLU_RS11385	0.74	-0.4
2,525,951	+		PFLU_RS11385	0.74	+1.2
2,525,951	+		PFLU_RS11385	0.74	-1.2
2,525,951	+		PFLU_RS11385	0.74	+1.4
2,525,951	+		PFLU_RS11385	0.74	-0.7
2,525,951	+		PFLU_RS11385	0.74	-0.6
2,525,951	+		PFLU_RS11385	0.74	-1.6
2,525,952	-		PFLU_RS11385	0.74	+0.3
2,525,952	-		PFLU_RS11385	0.74	-0.4
2,525,952	-		PFLU_RS11385	0.74	+0.8
2,526,038	+		PFLU_RS11385	0.81	+0.7
2,526,038	+		PFLU_RS11385	0.81	-1.1
2,526,038	+		PFLU_RS11385	0.81	+1.4
2,526,039	-		PFLU_RS11385	0.81	-2.0
2,526,039	-		PFLU_RS11385	0.81	+0.7
2,526,089	+		PFLU_RS11385	0.85	+0.9
2,526,089	+		PFLU_RS11385	0.85	+1.8
2,526,140	+		PFLU_RS11385	0.89	-0.4
2,526,140	+		PFLU_RS11385	0.89	+0.8
2,526,141	-		PFLU_RS11385	0.89	-1.2
2,526,141	-		PFLU_RS11385	0.89	-0.9
2,526,141	-		PFLU_RS11385	0.89	-0.8
2,526,143	+		PFLU_RS11385	0.89	-1.4
2,526,143	+		PFLU_RS11385	0.89	+0.1
2,526,143	+		PFLU_RS11385	0.89	+0.3
2,526,144	-		PFLU_RS11385	0.89	-1.2
2,526,144	-		PFLU_RS11385	0.89	-0.3
2,526,144	-		PFLU_RS11385	0.89	+1.3
2,526,144	-		PFLU_RS11385	0.89	-0.6
2,526,144	-		PFLU_RS11385	0.89	+1.4
2,526,192	-				+1.1
2,526,265	+				+0.8
2,526,280	-				+0.8
2,526,280	-				-1.4
2,526,280	-				+0.1
2,526,679	-		PFLU_RS11390	0.46	-0.3
2,526,724	+		PFLU_RS11390	0.51	+0.1
2,526,725	-		PFLU_RS11390	0.51	+0.4
2,527,018	+		PFLU_RS11390	0.84	-0.2
2,527,018	+		PFLU_RS11390	0.84	-0.3
2,527,018	+		PFLU_RS11390	0.84	+0.1
2,527,018	+		PFLU_RS11390	0.84	-0.0
2,527,018	+		PFLU_RS11390	0.84	+1.3
2,527,018	+		PFLU_RS11390	0.84	+0.1
2,527,018	+		PFLU_RS11390	0.84	+1.3
2,527,018	+		PFLU_RS11390	0.84	+0.4
2,527,018	+		PFLU_RS11390	0.84	-1.4
2,527,018	+		PFLU_RS11390	0.84	+0.5
2,527,019	-		PFLU_RS11390	0.84	+1.0
2,527,019	-		PFLU_RS11390	0.84	+0.6
2,527,019	-		PFLU_RS11390	0.84	-0.5
2,527,019	-		PFLU_RS11390	0.84	+1.4
2,527,019	-		PFLU_RS11390	0.84	+1.2
2,527,019	-		PFLU_RS11390	0.84	+0.0
2,527,019	-		PFLU_RS11390	0.84	+0.2
2,527,019	-		PFLU_RS11390	0.84	-0.9
2,527,019	-		PFLU_RS11390	0.84	+0.4
2,527,019	-		PFLU_RS11390	0.84	-0.6
2,527,019	-		PFLU_RS11390	0.84	+1.2
2,527,219	-				-1.2
2,527,219	-				+0.3
2,527,287	+		PFLU_RS11395	0.14	-0.9
2,527,287	+		PFLU_RS11395	0.14	-0.6
2,527,287	+		PFLU_RS11395	0.14	-0.3
2,527,287	+		PFLU_RS11395	0.14	+0.8
2,527,287	+		PFLU_RS11395	0.14	-1.4
2,527,287	+		PFLU_RS11395	0.14	+1.0
2,527,288	-		PFLU_RS11395	0.14	+0.7
2,527,288	-		PFLU_RS11395	0.14	-2.9
2,527,288	-		PFLU_RS11395	0.14	-1.7
2,527,288	-		PFLU_RS11395	0.14	+0.6
2,527,353	+		PFLU_RS11395	0.22	-0.4
2,527,353	+		PFLU_RS11395	0.22	+0.2
2,527,353	+		PFLU_RS11395	0.22	+0.3
2,527,353	+		PFLU_RS11395	0.22	+0.0
2,527,393	-		PFLU_RS11395	0.27	+1.1
2,527,404	+		PFLU_RS11395	0.28	-0.7
2,527,503	+		PFLU_RS11395	0.39	-0.3
2,527,503	+		PFLU_RS11395	0.39	-0.7
2,527,504	-		PFLU_RS11395	0.39	+0.3
2,527,504	-		PFLU_RS11395	0.39	-1.0
2,527,504	-		PFLU_RS11395	0.39	-0.9
2,527,504	-		PFLU_RS11395	0.39	-0.1
2,527,504	-		PFLU_RS11395	0.39	+1.8
2,527,599	+		PFLU_RS11395	0.50	-0.6
2,527,599	+		PFLU_RS11395	0.50	+1.4
2,527,600	-		PFLU_RS11395	0.50	+0.0
2,527,600	-		PFLU_RS11395	0.50	-0.4
2,527,603	+		PFLU_RS11395	0.51	+0.2
2,527,603	+		PFLU_RS11395	0.51	-1.6
2,527,603	+		PFLU_RS11395	0.51	+0.1
2,527,604	-		PFLU_RS11395	0.51	-1.9
2,527,702	-		PFLU_RS11395	0.62	-2.0
2,527,929	+		PFLU_RS11395	0.88	-0.2
2,527,929	+		PFLU_RS11395	0.88	-0.7
2,527,929	+		PFLU_RS11395	0.88	+1.1
2,527,929	+		PFLU_RS11395	0.88	-1.2
2,527,930	-		PFLU_RS11395	0.88	-0.7
2,527,930	-		PFLU_RS11395	0.88	-1.7
2,527,930	-		PFLU_RS11395	0.88	-0.0
2,527,930	-		PFLU_RS11395	0.88	+0.3
2,527,930	-		PFLU_RS11395	0.88	+0.6
2,527,950	+				-0.4
2,527,951	-				+0.1
2,527,951	-				-1.0
2,527,951	-				+1.4
2,527,951	-				-0.0
2,527,951	-				-0.5
2,528,148	+				+0.7
2,528,148	+				-1.0
2,528,149	-				-0.2
2,528,149	-				-0.0
2,528,151	-				-0.6