Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11340

Experiment: 4-Hydroxyphenylpropionic (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxyphenylpropionic (C) 5 mM
2,513,264	+				-1.0
2,513,382	+				-0.2
2,513,383	-				-1.2
2,513,433	+				-0.2
2,513,526	+				+0.2
2,513,526	+				+0.4
2,513,526	+				+0.1
2,513,526	+				-0.1
2,513,526	+				+1.2
2,513,526	+				+2.6
2,513,526	+				-1.2
2,513,526	+				+1.6
2,513,526	+				-1.9
2,513,526	+				-0.5
2,513,526	+				+1.4
2,513,526	+				+0.1
2,513,526	+				-0.4
2,513,526	+				+0.4
2,513,526	+				-1.0
2,513,526	+				+1.4
2,513,526	+				-0.5
2,513,526	+				-0.0
2,513,526	+				-0.7
2,513,526	+				+0.4
2,513,526	+				-1.2
2,513,526	+				-0.2
2,513,526	+				+0.2
2,513,526	+				+1.0
2,513,526	+				+1.2
2,513,526	+				-0.1
2,513,526	+				-1.6
2,513,526	+				-0.0
2,513,526	+				-1.4
2,513,526	+				+1.4
2,513,526	+				-0.2
2,513,526	+				-2.0
2,513,526	+				-0.4
2,513,526	+				-0.4
2,513,526	+				-1.8
2,513,526	+				+0.9
2,513,526	+				-0.7
2,513,526	+				-2.1
2,513,526	+				-1.2
2,513,526	+				+1.2
2,513,526	+				-0.6
2,513,526	+				-0.1
2,513,526	+				+1.1
2,513,526	+				-1.6
2,513,526	+				+0.1
2,513,526	+				+1.0
2,513,526	+				-2.2
2,513,526	+				+0.7
2,513,527	-				-0.9
2,513,527	-				+0.8
2,513,527	-				+0.7
2,513,527	-				-1.8
2,513,527	-				-0.3
2,513,527	-				+2.4
2,513,527	-				+0.6
2,513,527	-				-0.6
2,513,527	-				-1.9
2,513,527	-				+0.2
2,513,527	-				+0.2
2,513,527	-				-1.2
2,513,527	-				-0.8
2,513,527	-				-0.4
2,513,527	-				-0.1
2,513,527	-				-0.0
2,513,527	-				-1.2
2,513,527	-				+1.2
2,513,527	-				-1.0
2,513,527	-				-0.2
2,513,527	-				+0.1
2,513,527	-				+1.2
2,513,527	-				-0.3
2,513,527	-				+1.0
2,513,527	-				+1.0
2,513,527	-				-1.2
2,513,527	-				-2.6
2,513,527	-				+1.2
2,513,527	-				-0.4
2,513,527	-				+1.2
2,513,527	-				-0.1
2,513,527	-				+1.6
2,513,527	-				-1.6
2,513,527	-				-0.6
2,513,527	-				-0.5
2,513,527	-				-0.9
2,513,527	-				+0.1
2,513,527	-				-0.6
2,513,527	-				-1.8
2,513,527	-				+1.0
2,513,527	-				+0.6
2,513,527	-				-0.2
2,513,529	-				+0.4
2,513,530	+				-1.6
2,513,537	+				-0.2
2,513,537	+				-1.6
2,513,537	+				-0.3
2,513,537	+				-1.0
2,513,537	+				+0.4
2,513,537	+				-0.8
2,513,537	+				+0.0
2,513,537	+				-0.1
2,513,538	-				+1.5
2,513,538	-				+2.7
2,513,538	-				+0.7
2,513,538	-				-0.9
2,513,538	-				+2.4
2,513,538	-				-1.6
2,513,644	+				-0.6
2,513,644	+				-0.1
2,513,644	+				+0.3
2,513,644	+				+2.0
2,513,645	-				-1.8
2,513,645	-				+0.7
2,513,645	-				-0.8
2,513,654	+				-1.5
2,513,655	-				-0.2
2,513,655	-				-0.6
2,513,655	-				-0.5
2,513,833	-		PFLU_RS11340	0.23	+1.4
2,513,984	+		PFLU_RS11340	0.45	-0.1
2,513,985	-		PFLU_RS11340	0.45	-0.0
2,514,101	+		PFLU_RS11340	0.63	-1.6
2,514,102	-		PFLU_RS11340	0.63	+0.7
2,514,102	-		PFLU_RS11340	0.63	+0.6
2,514,102	-		PFLU_RS11340	0.63	+0.1
2,514,230	+		PFLU_RS11340	0.82	-0.6
2,514,230	+		PFLU_RS11340	0.82	-0.0
2,514,230	+		PFLU_RS11340	0.82	-1.2
2,514,230	+		PFLU_RS11340	0.82	+0.9
2,514,230	+		PFLU_RS11340	0.82	-0.4
2,514,230	+		PFLU_RS11340	0.82	+0.5
2,514,231	-		PFLU_RS11340	0.82	+1.0
2,514,231	-		PFLU_RS11340	0.82	-0.2
2,514,231	-		PFLU_RS11340	0.82	-2.3
2,514,231	-		PFLU_RS11340	0.82	-0.6
2,514,386	+				-0.5
2,514,419	-				+0.6
2,514,419	-				+0.1
2,514,419	-				+0.6
2,514,419	-				-0.5
2,514,419	-				-1.0
2,514,488	-		PFLU_RS11345	0.11	+1.6
2,515,009	+		PFLU_RS11345	0.54	+1.2
2,515,009	+		PFLU_RS11345	0.54	-0.0
2,515,009	+		PFLU_RS11345	0.54	-1.0
2,515,010	-		PFLU_RS11345	0.54	-0.9
2,515,010	-		PFLU_RS11345	0.54	-0.2
2,515,082	-		PFLU_RS11345	0.60	+0.4
2,515,082	-		PFLU_RS11345	0.60	-0.4
2,515,082	-		PFLU_RS11345	0.60	+0.7
2,515,335	+		PFLU_RS11345	0.81	+2.0
2,515,336	-		PFLU_RS11345	0.81	+0.7
2,515,336	-		PFLU_RS11345	0.81	-1.0
2,515,344	+		PFLU_RS11345	0.81	-0.8
2,515,345	-		PFLU_RS11345	0.82	+1.1