Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS09720

Experiment: p-Coumaric (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) 5 mM
2,144,753	+		PFLU_RS09715	0.70	-0.3
2,144,753	+		PFLU_RS09715	0.70	-0.8
2,144,753	+		PFLU_RS09715	0.70	+1.5
2,144,753	+		PFLU_RS09715	0.70	+0.9
2,144,753	+		PFLU_RS09715	0.70	+1.4
2,144,753	+		PFLU_RS09715	0.70	-0.6
2,144,754	-		PFLU_RS09715	0.70	-1.0
2,144,754	-		PFLU_RS09715	0.70	+0.9
2,144,754	-		PFLU_RS09715	0.70	+1.0
2,144,754	-		PFLU_RS09715	0.70	-1.1
2,144,754	-		PFLU_RS09715	0.70	+1.9
2,144,754	-		PFLU_RS09715	0.70	-1.4
2,144,754	-		PFLU_RS09715	0.70	+1.1
2,144,754	-		PFLU_RS09715	0.70	+0.2
2,144,754	-		PFLU_RS09715	0.70	+0.2
2,144,797	-		PFLU_RS09715	0.72	-0.3
2,144,887	-		PFLU_RS09715	0.77	-0.3
2,144,887	-		PFLU_RS09715	0.77	-1.0
2,144,887	-		PFLU_RS09715	0.77	+0.8
2,144,989	-		PFLU_RS09715	0.82	+1.0
2,144,989	-		PFLU_RS09715	0.82	+2.6
2,145,152	+				-1.5
2,145,152	+				+0.3
2,145,153	-				+1.3
2,145,153	-				-0.5
2,145,178	-				+3.0
2,145,189	+				-2.0
2,145,190	-				+2.6
2,145,190	-				-0.3
2,145,190	-				+2.3
2,145,215	+				-2.3
2,145,291	-				+0.0
2,145,343	+				+1.8
2,145,343	+				+2.9
2,145,343	+				-1.3
2,145,344	-				-0.0
2,145,344	-				-0.3
2,145,344	-				+2.5
2,145,344	-				-1.4
2,145,399	+				-2.3
2,145,428	+				-0.0
2,145,428	+				+1.3
2,145,428	+				+2.9
2,145,428	+				-1.8
2,145,428	+				-0.3
2,145,428	+				-2.3
2,145,428	+				-0.2
2,145,428	+				-1.0
2,145,428	+				-1.2
2,145,429	-				+1.8
2,145,429	-				+3.3
2,145,429	-				+1.1
2,145,429	-				-0.5
2,145,431	+				-0.3
2,145,431	+				-1.3
2,145,432	-				-0.4
2,145,513	+				+0.7
2,145,513	+				+1.1
2,145,513	+				+1.1
2,145,514	-				+0.7
2,145,550	-				-1.0
2,145,573	+				+1.8
2,145,574	-				-0.0
2,145,784	+		PFLU_RS09720	0.46	-1.0
2,145,784	+		PFLU_RS09720	0.46	-1.6
2,145,929	+		PFLU_RS09720	0.77	-2.2
2,145,929	+		PFLU_RS09720	0.77	-0.9
2,146,029	+				+1.6
2,146,029	+				-0.9
2,146,029	+				+0.1
2,146,030	-				-1.1
2,146,030	-				-0.9
2,146,041	+				-0.7
2,146,147	-		PFLU_RS09725	0.22	+1.3
2,146,337	-		PFLU_RS09725	0.59	-1.4
2,146,359	+		PFLU_RS09725	0.63	-0.6
2,146,383	+		PFLU_RS09725	0.68	-0.5
2,146,383	+		PFLU_RS09725	0.68	+0.5
2,146,384	-		PFLU_RS09725	0.68	+0.3
2,146,384	-		PFLU_RS09725	0.68	-0.5
2,146,384	-		PFLU_RS09725	0.68	+0.6
2,146,384	-		PFLU_RS09725	0.68	-0.7
2,146,384	-		PFLU_RS09725	0.68	+0.8
2,146,384	-		PFLU_RS09725	0.68	-1.2
2,146,442	+		PFLU_RS09725	0.79	-0.9
2,146,442	+		PFLU_RS09725	0.79	-1.7
2,146,443	-		PFLU_RS09725	0.79	-1.5
2,146,443	-		PFLU_RS09725	0.79	-0.3
2,146,465	-		PFLU_RS09725	0.83	-1.1
2,146,880	+		PFLU_RS09730	0.44	-3.2
2,146,892	+		PFLU_RS09730	0.46	+0.1
2,146,892	+		PFLU_RS09730	0.46	-0.2
2,146,892	+		PFLU_RS09730	0.46	+0.3
2,146,920	+		PFLU_RS09730	0.49	+1.3
2,146,953	+		PFLU_RS09730	0.54	-0.3
2,146,953	+		PFLU_RS09730	0.54	-2.1
2,146,953	+		PFLU_RS09730	0.54	-0.2
2,146,954	-		PFLU_RS09730	0.54	+0.5
2,146,954	-		PFLU_RS09730	0.54	+2.0