Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS07485

Experiment: p-Coumaric (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) 5 mM
1,664,862	+				+0.4
1,664,862	+				+0.2
1,664,862	+				-1.5
1,664,863	-				+0.3
1,664,863	-				-0.2
1,664,863	-				-1.7
1,664,863	-				-0.0
1,664,863	-				-1.3
1,664,863	-				-0.0
1,664,863	-				+1.8
1,664,974	+				-0.0
1,664,974	+				-0.7
1,664,974	+				-0.1
1,664,975	-				+0.4
1,664,975	-				-0.1
1,664,975	-				+0.4
1,664,975	-				-0.5
1,664,975	-				+0.4
1,664,975	-				-1.2
1,665,021	+				+1.2
1,665,021	+				-2.4
1,665,021	+				+0.1
1,665,021	+				+1.2
1,665,021	+				+2.3
1,665,022	-				-2.4
1,665,022	-				+0.5
1,665,022	-				+2.0
1,665,042	+				-0.7
1,665,042	+				+0.7
1,665,043	-				-0.5
1,665,043	-				-0.5
1,665,043	-				-1.2
1,665,043	-				+0.5
1,665,043	-				+1.1
1,665,118	-		PFLU_RS07480	0.13	-1.3
1,665,177	+		PFLU_RS07480	0.23	+0.7
1,665,177	+		PFLU_RS07480	0.23	-1.2
1,665,462	+		PFLU_RS07480	0.72	+0.3
1,665,489	+		PFLU_RS07480	0.77	-0.9
1,665,489	+		PFLU_RS07480	0.77	-1.3
1,665,490	-		PFLU_RS07480	0.77	+0.1
1,665,490	-		PFLU_RS07480	0.77	+1.3
1,665,490	-		PFLU_RS07480	0.77	-1.8
1,665,490	-		PFLU_RS07480	0.77	+0.9
1,665,490	-		PFLU_RS07480	0.77	-1.4
1,665,661	+				-0.1
1,665,661	+				+1.5
1,665,661	+				-0.5
1,665,661	+				-0.5
1,665,661	+				-3.2
1,665,662	-				-0.9
1,665,662	-				+0.7
1,665,675	+				-1.4
1,665,675	+				-1.6
1,665,675	+				-0.0
1,665,676	-				-3.2
1,665,676	-				-1.1
1,665,676	-				+1.8
1,665,693	+				+1.8
1,665,693	+				+0.2
1,665,693	+				-0.9
1,665,693	+				-0.0
1,665,694	-				-1.4
1,665,694	-				-0.2
1,665,737	+				-0.1
1,665,738	-				-0.7
1,665,738	-				+1.3
1,665,758	+				-0.2
1,665,758	+				-1.9
1,665,758	+				+0.7
1,665,758	+				-1.6
1,665,759	-				-1.3
1,665,764	+				-2.0
1,665,772	+				+2.3
1,665,772	+				+2.0
1,665,772	+				-1.9
1,665,772	+				+2.9
1,665,772	+				-1.6
1,665,772	+				-1.3
1,665,772	+				+0.1
1,665,772	+				+1.0
1,665,772	+				-0.3
1,665,773	-				-0.4
1,665,773	-				-0.2
1,665,773	-				-1.1
1,665,773	-				-0.2
1,665,773	-				-0.9
1,665,773	-				-0.3
1,665,773	-				+1.4
1,665,773	-				+0.4
1,665,773	-				+1.6
1,665,773	-				-1.1
1,665,914	+		PFLU_RS07485	0.30	-1.9
1,665,914	+		PFLU_RS07485	0.30	-3.3
1,665,914	+		PFLU_RS07485	0.30	-0.2
1,665,914	+		PFLU_RS07485	0.30	+1.2
1,665,915	-		PFLU_RS07485	0.30	+2.1
1,665,915	-		PFLU_RS07485	0.30	-1.7
1,665,915	-		PFLU_RS07485	0.30	+1.5
1,665,915	-		PFLU_RS07485	0.30	+0.1
1,665,917	+		PFLU_RS07485	0.31	-0.1
1,665,917	+		PFLU_RS07485	0.31	+2.3
1,665,918	-		PFLU_RS07485	0.31	+1.1
1,665,925	+		PFLU_RS07485	0.32	+0.8
1,665,971	+		PFLU_RS07485	0.43	-0.2
1,666,144	+		PFLU_RS07485	0.81	-1.7
1,666,144	+		PFLU_RS07485	0.81	+2.5
1,666,144	+		PFLU_RS07485	0.81	-1.0
1,666,144	+		PFLU_RS07485	0.81	+3.0
1,666,144	+		PFLU_RS07485	0.81	+0.3
1,666,144	+		PFLU_RS07485	0.81	+0.7
1,666,144	+		PFLU_RS07485	0.81	-1.3
1,666,144	+		PFLU_RS07485	0.81	+1.3
1,666,144	+		PFLU_RS07485	0.81	-1.3
1,666,144	+		PFLU_RS07485	0.81	-0.9
1,666,144	+		PFLU_RS07485	0.81	-0.5
1,666,145	-		PFLU_RS07485	0.81	-1.5
1,666,145	-		PFLU_RS07485	0.81	-1.3
1,666,145	-		PFLU_RS07485	0.81	+0.3
1,666,145	-		PFLU_RS07485	0.81	+2.3
1,666,145	-		PFLU_RS07485	0.81	-0.1
1,666,145	-		PFLU_RS07485	0.81	+0.3
1,666,145	-		PFLU_RS07485	0.81	+0.3
1,666,145	-		PFLU_RS07485	0.81	-0.6
1,666,145	-		PFLU_RS07485	0.81	-0.3
1,666,145	-		PFLU_RS07485	0.81	-2.3
1,666,145	-		PFLU_RS07485	0.81	+0.5
1,666,145	-		PFLU_RS07485	0.81	+0.5
1,666,145	-		PFLU_RS07485	0.81	+0.1
1,666,145	-		PFLU_RS07485	0.81	+1.6
1,666,205	+				+0.6
1,666,205	+				-1.6
1,666,205	+				+1.0
1,666,205	+				+0.3
1,666,205	+				+0.1
1,666,205	+				-0.6
1,666,206	-				-0.5
1,666,268	-				-1.0
1,666,329	+				+2.0
1,666,330	-				-3.3
1,666,330	-				+1.0
1,666,369	+		PFLU_RS07490	0.10	-1.0
1,666,369	+		PFLU_RS07490	0.10	-2.3
1,666,369	+		PFLU_RS07490	0.10	+0.9
1,666,369	+		PFLU_RS07490	0.10	-0.0
1,666,369	+		PFLU_RS07490	0.10	+0.5
1,666,369	+		PFLU_RS07490	0.10	-1.5
1,666,370	-		PFLU_RS07490	0.10	-1.0
1,666,370	-		PFLU_RS07490	0.10	-1.5
1,666,370	-		PFLU_RS07490	0.10	-0.3
1,666,370	-		PFLU_RS07490	0.10	+0.5
1,666,370	-		PFLU_RS07490	0.10	-0.8
1,666,370	-		PFLU_RS07490	0.10	+1.3
1,666,375	+		PFLU_RS07490	0.11	-2.3
1,666,375	+		PFLU_RS07490	0.11	+1.7
1,666,375	+		PFLU_RS07490	0.11	+0.4
1,666,375	+		PFLU_RS07490	0.11	-3.1
1,666,375	+		PFLU_RS07490	0.11	+0.9
1,666,375	+		PFLU_RS07490	0.11	+1.1
1,666,375	+		PFLU_RS07490	0.11	-1.1
1,666,376	-		PFLU_RS07490	0.11	-0.7
1,666,376	-		PFLU_RS07490	0.11	-0.6
1,666,376	-		PFLU_RS07490	0.11	-0.9
1,666,376	-		PFLU_RS07490	0.11	-0.0
1,666,376	-		PFLU_RS07490	0.11	+1.0
1,666,376	-		PFLU_RS07490	0.11	+0.6
1,666,376	-		PFLU_RS07490	0.11	+1.0
1,666,376	-		PFLU_RS07490	0.11	-0.5
1,666,376	-		PFLU_RS07490	0.11	+0.2
1,666,376	-		PFLU_RS07490	0.11	-0.1
1,666,376	-		PFLU_RS07490	0.11	+0.2
1,666,376	-		PFLU_RS07490	0.11	+0.3
1,666,376	-		PFLU_RS07490	0.11	-1.4
1,666,437	+		PFLU_RS07490	0.16	-1.9
1,666,438	-		PFLU_RS07490	0.16	-1.3
1,666,438	-		PFLU_RS07490	0.16	+0.1
1,666,438	-		PFLU_RS07490	0.16	-0.8
1,666,438	-		PFLU_RS07490	0.16	-0.0
1,666,524	+		PFLU_RS07490	0.23	+0.1
1,666,539	-		PFLU_RS07490	0.24	-0.6
1,666,559	+		PFLU_RS07490	0.26	+1.6
1,666,560	-		PFLU_RS07490	0.26	+0.7
1,666,563	+		PFLU_RS07490	0.26	-0.3
1,666,563	+		PFLU_RS07490	0.26	+0.7
1,666,563	+		PFLU_RS07490	0.26	-0.6
1,666,563	+		PFLU_RS07490	0.26	+1.3
1,666,563	+		PFLU_RS07490	0.26	-2.4
1,666,563	+		PFLU_RS07490	0.26	+0.2
1,666,563	+		PFLU_RS07490	0.26	-1.5
1,666,563	+		PFLU_RS07490	0.26	+0.5
1,666,563	+		PFLU_RS07490	0.26	-1.5
1,666,563	+		PFLU_RS07490	0.26	-0.4
1,666,563	+		PFLU_RS07490	0.26	+2.1
1,666,563	+		PFLU_RS07490	0.26	+1.8
1,666,563	+		PFLU_RS07490	0.26	-0.5
1,666,563	+		PFLU_RS07490	0.26	+1.6
1,666,563	+		PFLU_RS07490	0.26	-0.2
1,666,563	+		PFLU_RS07490	0.26	-0.5
1,666,563	+		PFLU_RS07490	0.26	+0.5
1,666,563	+		PFLU_RS07490	0.26	-2.7
1,666,563	+		PFLU_RS07490	0.26	-0.7
1,666,563	+		PFLU_RS07490	0.26	-0.5
1,666,563	+		PFLU_RS07490	0.26	+0.8
1,666,563	+		PFLU_RS07490	0.26	+2.1
1,666,563	+		PFLU_RS07490	0.26	+1.4
1,666,564	-		PFLU_RS07490	0.26	+0.6
1,666,564	-		PFLU_RS07490	0.26	+0.3
1,666,564	-		PFLU_RS07490	0.26	-0.5
1,666,564	-		PFLU_RS07490	0.26	+1.1
1,666,564	-		PFLU_RS07490	0.26	+0.5
1,666,564	-		PFLU_RS07490	0.26	-1.6
1,666,564	-		PFLU_RS07490	0.26	-1.4
1,666,564	-		PFLU_RS07490	0.26	-0.9
1,666,564	-		PFLU_RS07490	0.26	-0.3
1,666,564	-		PFLU_RS07490	0.26	+3.3
1,666,564	-		PFLU_RS07490	0.26	+2.2
1,666,564	-		PFLU_RS07490	0.26	-2.2
1,666,564	-		PFLU_RS07490	0.26	+1.2
1,666,564	-		PFLU_RS07490	0.26	-0.4
1,666,564	-		PFLU_RS07490	0.26	-1.9
1,666,564	-		PFLU_RS07490	0.26	-0.0
1,666,564	-		PFLU_RS07490	0.26	+1.2
1,666,564	-		PFLU_RS07490	0.26	+0.8
1,666,564	-		PFLU_RS07490	0.26	-0.6
1,666,564	-		PFLU_RS07490	0.26	+0.3
1,666,564	-		PFLU_RS07490	0.26	-0.0
1,666,564	-		PFLU_RS07490	0.26	+1.5
1,666,871	+		PFLU_RS07490	0.52	+0.1
1,666,879	+		PFLU_RS07490	0.52	-0.7
1,666,879	+		PFLU_RS07490	0.52	-1.3
1,666,879	+		PFLU_RS07490	0.52	-1.0
1,666,879	+		PFLU_RS07490	0.52	-0.6
1,666,879	+		PFLU_RS07490	0.52	-1.2
1,666,879	+		PFLU_RS07490	0.52	+1.1
1,666,879	+		PFLU_RS07490	0.52	-2.1
1,666,879	+		PFLU_RS07490	0.52	-0.0
1,666,879	+		PFLU_RS07490	0.52	-0.0
1,666,879	+		PFLU_RS07490	0.52	-2.1
1,666,879	+		PFLU_RS07490	0.52	+0.3
1,666,879	+		PFLU_RS07490	0.52	-0.9
1,666,879	+		PFLU_RS07490	0.52	+0.1
1,666,879	+		PFLU_RS07490	0.52	-0.6
1,666,879	+		PFLU_RS07490	0.52	+0.7
1,666,879	+		PFLU_RS07490	0.52	-0.9
1,666,879	+		PFLU_RS07490	0.52	-2.5
1,666,879	+		PFLU_RS07490	0.52	-0.3
1,666,880	-		PFLU_RS07490	0.52	-0.5
1,666,880	-		PFLU_RS07490	0.52	-2.3
1,666,880	-		PFLU_RS07490	0.52	-1.5
1,666,880	-		PFLU_RS07490	0.52	+1.4
1,666,880	-		PFLU_RS07490	0.52	-0.2
1,666,880	-		PFLU_RS07490	0.52	+3.9
1,666,880	-		PFLU_RS07490	0.52	+1.0
1,666,880	-		PFLU_RS07490	0.52	-1.0
1,666,880	-		PFLU_RS07490	0.52	-1.6
1,666,880	-		PFLU_RS07490	0.52	-0.9
1,666,880	-		PFLU_RS07490	0.52	+0.5
1,666,880	-		PFLU_RS07490	0.52	+0.9
1,666,880	-		PFLU_RS07490	0.52	-0.6
1,667,007	+		PFLU_RS07490	0.63	-0.9
1,667,007	+		PFLU_RS07490	0.63	-0.9
1,667,007	+		PFLU_RS07490	0.63	-0.5
1,667,007	+		PFLU_RS07490	0.63	+0.7
1,667,008	-		PFLU_RS07490	0.63	+1.4
1,667,008	-		PFLU_RS07490	0.63	+2.5
1,667,136	+		PFLU_RS07490	0.73	-0.8
1,667,136	+		PFLU_RS07490	0.73	+0.2
1,667,136	+		PFLU_RS07490	0.73	+0.2
1,667,136	+		PFLU_RS07490	0.73	+1.7
1,667,136	+		PFLU_RS07490	0.73	-0.0
1,667,137	-		PFLU_RS07490	0.73	+2.1
1,667,137	-		PFLU_RS07490	0.73	-1.4
1,667,139	+		PFLU_RS07490	0.73	-2.1
1,667,139	+		PFLU_RS07490	0.73	-2.0
1,667,139	+		PFLU_RS07490	0.73	+0.9
1,667,139	+		PFLU_RS07490	0.73	+2.1
1,667,139	+		PFLU_RS07490	0.73	+0.8
1,667,140	-		PFLU_RS07490	0.74	-1.9
1,667,140	-		PFLU_RS07490	0.74	-0.7
1,667,140	-		PFLU_RS07490	0.74	+1.5
1,667,140	-		PFLU_RS07490	0.74	+0.5
1,667,140	-		PFLU_RS07490	0.74	-0.0
1,667,140	-		PFLU_RS07490	0.74	+1.1
1,667,140	-		PFLU_RS07490	0.74	+2.5
1,667,140	-		PFLU_RS07490	0.74	+0.7
1,667,140	-		PFLU_RS07490	0.74	+2.3