Experiment: Cobalt chloride 0.07 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3131 and Psest_3132 are separated by 5 nucleotides Psest_3132 and Psest_3133 are separated by 5 nucleotides Psest_3133 and Psest_3134 are separated by 199 nucleotides Psest_3134 and Psest_3135 are separated by 245 nucleotides
Psest_3131: Psest_3131 - tRNA (guanine-N1)-methyltransferase, at 3,307,275 to 3,308,027
_3131
Psest_3132: Psest_3132 - 16S rRNA processing protein RimM, at 3,308,033 to 3,308,569
_3132
Psest_3133: Psest_3133 - ribosomal protein S16, at 3,308,575 to 3,308,826
_3133
Psest_3134: Psest_3134 - signal recognition particle protein, at 3,309,026 to 3,310,402
_3134
Psest_3135: Psest_3135 - ABC-type uncharacterized transport system, permease component, at 3,310,648 to 3,311,448
_3135
Position (kb)
3309
3310
3311 Strain fitness (log2 ratio)
-1
0
1 at 3308.941 kb on - strand at 3310.440 kb on - strand at 3310.441 kb on + strand at 3310.441 kb on + strand at 3310.442 kb on - strand at 3310.442 kb on - strand at 3310.442 kb on - strand at 3310.442 kb on - strand at 3310.442 kb on - strand at 3310.442 kb on - strand at 3310.442 kb on - strand at 3310.442 kb on - strand at 3310.442 kb on - strand at 3310.442 kb on - strand at 3310.442 kb on - strand at 3310.442 kb on - strand at 3310.442 kb on - strand at 3310.442 kb on - strand at 3310.442 kb on - strand at 3310.442 kb on - strand at 3310.571 kb on - strand at 3310.575 kb on - strand at 3310.647 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.07 mM remove 3,308,941 - +0.1 3,310,440 - -0.1 3,310,441 + +0.8 3,310,441 + +0.6 3,310,442 - +0.4 3,310,442 - +0.4 3,310,442 - -1.4 3,310,442 - +0.3 3,310,442 - -1.0 3,310,442 - +1.1 3,310,442 - -0.4 3,310,442 - +1.4 3,310,442 - +0.6 3,310,442 - -0.4 3,310,442 - +0.6 3,310,442 - +1.0 3,310,442 - +0.5 3,310,442 - -0.1 3,310,442 - +0.9 3,310,442 - -0.8 3,310,571 - -0.7 3,310,575 - +0.2 3,310,647 + +1.2
Or see this region's nucleotide sequence