Experiment: Cobalt chloride 0.07 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2875 and Psest_2876 are separated by 121 nucleotides Psest_2876 and Psest_2877 are separated by 78 nucleotides Psest_2877 and Psest_2878 are separated by 86 nucleotides Psest_2878 and Psest_2879 overlap by 4 nucleotides Psest_2879 and Psest_2880 overlap by 8 nucleotides
Psest_2875: Psest_2875 - DNA mismatch repair protein MutS, at 3,066,249 to 3,068,828
_2875
Psest_2876: Psest_2876 - Ferredoxin, at 3,068,950 to 3,069,273
_2876
Psest_2877: Psest_2877 - Uncharacterized protein conserved in bacteria, at 3,069,352 to 3,069,543
_2877
Psest_2878: Psest_2878 - conserved hypothetical protein, at 3,069,630 to 3,070,622
_2878
Psest_2879: Psest_2879 - Predicted deacetylase, at 3,070,619 to 3,071,380
_2879
Psest_2880: Psest_2880 - Glycosyltransferase, at 3,071,373 to 3,072,488
_2880
Position (kb)
3069
3070
3071 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3068.803 kb on + strand at 3068.805 kb on + strand at 3068.805 kb on + strand at 3068.805 kb on + strand at 3068.805 kb on + strand at 3068.805 kb on + strand at 3068.805 kb on + strand at 3068.805 kb on + strand at 3068.805 kb on + strand at 3068.806 kb on - strand at 3068.806 kb on - strand at 3068.806 kb on - strand at 3068.806 kb on - strand at 3068.806 kb on - strand at 3068.806 kb on - strand at 3068.806 kb on - strand at 3068.806 kb on - strand at 3068.806 kb on - strand at 3068.806 kb on - strand at 3068.846 kb on + strand at 3069.274 kb on + strand at 3069.274 kb on + strand at 3069.274 kb on + strand at 3069.572 kb on + strand at 3069.572 kb on + strand at 3069.572 kb on + strand at 3069.572 kb on + strand at 3069.572 kb on + strand at 3069.572 kb on + strand at 3069.572 kb on + strand at 3069.572 kb on + strand at 3069.572 kb on + strand at 3069.573 kb on - strand at 3069.573 kb on - strand at 3069.573 kb on - strand at 3069.573 kb on - strand at 3069.573 kb on - strand at 3069.573 kb on - strand at 3069.573 kb on - strand at 3069.573 kb on - strand at 3069.712 kb on + strand at 3069.713 kb on - strand at 3069.713 kb on - strand at 3069.713 kb on - strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.721 kb on + strand at 3069.721 kb on + strand at 3069.721 kb on + strand at 3069.722 kb on - strand at 3069.722 kb on - strand at 3069.722 kb on - strand at 3069.722 kb on - strand at 3069.722 kb on - strand at 3069.722 kb on - strand at 3069.759 kb on - strand, within Psest_2878 at 3069.903 kb on + strand, within Psest_2878 at 3070.032 kb on + strand, within Psest_2878 at 3070.033 kb on - strand, within Psest_2878 at 3070.222 kb on + strand, within Psest_2878 at 3070.222 kb on + strand, within Psest_2878 at 3070.222 kb on + strand, within Psest_2878 at 3070.222 kb on + strand, within Psest_2878 at 3070.222 kb on + strand, within Psest_2878 at 3070.222 kb on + strand, within Psest_2878 at 3070.222 kb on + strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.285 kb on + strand, within Psest_2878 at 3070.285 kb on + strand, within Psest_2878 at 3070.286 kb on - strand, within Psest_2878 at 3070.286 kb on - strand, within Psest_2878 at 3070.286 kb on - strand, within Psest_2878 at 3070.501 kb on - strand, within Psest_2878 at 3070.720 kb on - strand, within Psest_2879 at 3070.900 kb on - strand, within Psest_2879 at 3070.923 kb on + strand, within Psest_2879 at 3070.923 kb on + strand, within Psest_2879 at 3070.923 kb on + strand, within Psest_2879 at 3070.924 kb on - strand, within Psest_2879 at 3070.924 kb on - strand, within Psest_2879 at 3071.073 kb on + strand, within Psest_2879 at 3071.073 kb on + strand, within Psest_2879 at 3071.094 kb on + strand, within Psest_2879 at 3071.094 kb on + strand, within Psest_2879 at 3071.094 kb on + strand, within Psest_2879 at 3071.094 kb on + strand, within Psest_2879 at 3071.094 kb on + strand, within Psest_2879 at 3071.095 kb on - strand, within Psest_2879 at 3071.095 kb on - strand, within Psest_2879 at 3071.095 kb on - strand, within Psest_2879 at 3071.154 kb on + strand, within Psest_2879 at 3071.155 kb on - strand, within Psest_2879 at 3071.382 kb on + strand at 3071.383 kb on - strand at 3071.383 kb on - strand at 3071.383 kb on - strand at 3071.535 kb on - strand, within Psest_2880
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.07 mM remove 3,068,803 + -0.9 3,068,805 + +0.2 3,068,805 + -0.8 3,068,805 + -0.6 3,068,805 + -1.1 3,068,805 + -1.4 3,068,805 + -0.7 3,068,805 + -1.5 3,068,805 + -2.1 3,068,806 - +0.4 3,068,806 - -0.0 3,068,806 - +0.5 3,068,806 - +1.2 3,068,806 - -0.2 3,068,806 - -0.0 3,068,806 - -1.7 3,068,806 - +0.5 3,068,806 - +0.8 3,068,806 - -1.4 3,068,846 + -2.2 3,069,274 + -1.4 3,069,274 + +0.7 3,069,274 + +1.0 3,069,572 + -1.6 3,069,572 + +0.1 3,069,572 + +2.4 3,069,572 + -0.1 3,069,572 + +1.3 3,069,572 + -0.0 3,069,572 + +1.3 3,069,572 + +0.4 3,069,572 + -0.8 3,069,573 - -0.5 3,069,573 - +0.8 3,069,573 - +1.4 3,069,573 - -1.0 3,069,573 - -0.4 3,069,573 - -0.1 3,069,573 - +1.2 3,069,573 - -0.5 3,069,712 + -1.3 3,069,713 - -0.0 3,069,713 - +1.2 3,069,713 - +0.6 3,069,718 + +0.7 3,069,718 + +0.3 3,069,718 + -0.8 3,069,718 + -0.1 3,069,718 + +1.6 3,069,718 + +2.1 3,069,718 + +0.5 3,069,718 + -0.6 3,069,718 + -0.7 3,069,718 + -0.1 3,069,718 + +3.2 3,069,718 + -0.0 3,069,718 + -0.4 3,069,718 + +1.5 3,069,718 + -0.7 3,069,719 - -0.1 3,069,719 - -1.4 3,069,719 - +0.8 3,069,719 - -0.2 3,069,719 - +0.6 3,069,719 - -1.1 3,069,719 - +1.4 3,069,719 - -0.9 3,069,719 - +0.0 3,069,719 - -0.8 3,069,719 - +0.8 3,069,719 - +0.4 3,069,719 - -0.3 3,069,719 - +2.0 3,069,719 - +1.0 3,069,721 + -0.4 3,069,721 + +0.6 3,069,721 + +0.2 3,069,722 - +0.8 3,069,722 - -1.1 3,069,722 - -0.4 3,069,722 - +1.8 3,069,722 - -0.1 3,069,722 - -2.1 3,069,759 - Psest_2878 0.13 -1.3 3,069,903 + Psest_2878 0.27 +1.2 3,070,032 + Psest_2878 0.40 -2.1 3,070,033 - Psest_2878 0.41 +0.3 3,070,222 + Psest_2878 0.60 -0.9 3,070,222 + Psest_2878 0.60 -1.5 3,070,222 + Psest_2878 0.60 -2.1 3,070,222 + Psest_2878 0.60 -0.5 3,070,222 + Psest_2878 0.60 +1.2 3,070,222 + Psest_2878 0.60 +1.0 3,070,222 + Psest_2878 0.60 -2.4 3,070,223 - Psest_2878 0.60 -1.3 3,070,223 - Psest_2878 0.60 -0.0 3,070,223 - Psest_2878 0.60 +0.8 3,070,223 - Psest_2878 0.60 -1.6 3,070,223 - Psest_2878 0.60 -0.5 3,070,223 - Psest_2878 0.60 -1.3 3,070,223 - Psest_2878 0.60 +1.4 3,070,223 - Psest_2878 0.60 +0.7 3,070,223 - Psest_2878 0.60 +1.7 3,070,223 - Psest_2878 0.60 -0.4 3,070,223 - Psest_2878 0.60 -2.5 3,070,223 - Psest_2878 0.60 +0.2 3,070,285 + Psest_2878 0.66 -1.6 3,070,285 + Psest_2878 0.66 -1.3 3,070,286 - Psest_2878 0.66 -1.1 3,070,286 - Psest_2878 0.66 +0.3 3,070,286 - Psest_2878 0.66 -1.4 3,070,501 - Psest_2878 0.88 -1.1 3,070,720 - Psest_2879 0.13 -0.1 3,070,900 - Psest_2879 0.37 +0.6 3,070,923 + Psest_2879 0.40 +2.1 3,070,923 + Psest_2879 0.40 -1.5 3,070,923 + Psest_2879 0.40 +0.0 3,070,924 - Psest_2879 0.40 -2.1 3,070,924 - Psest_2879 0.40 +0.7 3,071,073 + Psest_2879 0.60 -0.8 3,071,073 + Psest_2879 0.60 -1.1 3,071,094 + Psest_2879 0.62 -2.0 3,071,094 + Psest_2879 0.62 +2.4 3,071,094 + Psest_2879 0.62 +1.2 3,071,094 + Psest_2879 0.62 -0.5 3,071,094 + Psest_2879 0.62 -2.3 3,071,095 - Psest_2879 0.62 +0.5 3,071,095 - Psest_2879 0.62 -1.2 3,071,095 - Psest_2879 0.62 +0.6 3,071,154 + Psest_2879 0.70 -0.1 3,071,155 - Psest_2879 0.70 -1.6 3,071,382 + +0.9 3,071,383 - -1.5 3,071,383 - -1.9 3,071,383 - -1.5 3,071,535 - Psest_2880 0.15 +0.8
Or see this region's nucleotide sequence