Strain Fitness in Sinorhizobium meliloti 1021 around SMc04456

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
2,527,011	+		SMc01595	0.80	+0.4
2,527,011	+		SMc01595	0.80	-1.8
2,527,012	-		SMc01595	0.80	+0.1
2,527,012	-		SMc01595	0.80	+0.0
2,527,018	-		SMc01595	0.81	-0.4
2,527,285	-				+0.1
2,527,471	+		SMc04456	0.50	-0.7
2,527,471	+		SMc04456	0.50	-0.4
2,527,472	-		SMc04456	0.51	-0.8
2,527,621	+				-0.3
2,527,680	-				+1.4
2,527,680	-				-0.4
2,527,961	+		SMc02677	0.26	-1.3
2,527,961	+		SMc02677	0.26	-0.6
2,527,961	+		SMc02677	0.26	-0.6
2,527,962	-		SMc02677	0.26	-0.7
2,528,017	-		SMc02677	0.33	-0.3
2,528,017	-		SMc02677	0.33	-0.0
2,528,198	-		SMc02677	0.55	-1.0
2,528,519	-				-0.2