Strain Fitness in Sinorhizobium meliloti 1021 around SMc03776
Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) |
|---|---|---|---|---|---|
| remove | |||||
| 3,442,195 | + | -0.0 | |||
| 3,442,656 | + | SMc03776 | 0.39 | -2.5 | |
| 3,442,743 | + | SMc03776 | 0.46 | +0.5 | |
| 3,442,743 | + | SMc03776 | 0.46 | -0.1 | |
| 3,442,743 | + | SMc03776 | 0.46 | -2.8 | |
| 3,442,745 | + | SMc03776 | 0.46 | -2.1 | |
| 3,443,341 | + | +0.8 | |||
| 3,443,342 | - | +1.9 | |||
| 3,443,767 | + | SMc03777 | 0.31 | -2.8 | |
| 3,443,767 | + | SMc03777 | 0.31 | -3.0 | |
| 3,444,097 | + | SMc03777 | 0.56 | -4.8 | |
| 3,444,097 | + | SMc03777 | 0.56 | -2.8 | |
| 3,444,097 | + | SMc03777 | 0.56 | -3.1 | |
| 3,444,097 | + | SMc03777 | 0.56 | -2.8 | |
| 3,444,097 | + | SMc03777 | 0.56 | -3.8 | |
| 3,444,097 | + | SMc03777 | 0.56 | -4.0 | |
| 3,444,097 | + | SMc03777 | 0.56 | -4.7 | |
| 3,444,097 | + | SMc03777 | 0.56 | -1.0 | |
| 3,444,197 | + | SMc03777 | 0.64 | -2.8 | |
| 3,444,197 | + | SMc03777 | 0.64 | -2.7 | |
| 3,444,293 | + | SMc03777 | 0.72 | -4.6 | |
| 3,444,293 | + | SMc03777 | 0.72 | -3.2 |
Or see this region's nucleotide sequence