Strain Fitness in Sinorhizobium meliloti 1021 around SMc03280

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
3,393,705	+				+0.3
3,393,705	+				+0.1
3,394,308	+		SMc03279	0.33	+1.2
3,394,391	-		SMc03279	0.56	+0.1
3,394,618	+				-0.2
3,394,619	-				+0.5
3,394,899	+		SMc03280	0.41	+0.1
3,394,899	+		SMc03280	0.41	+0.5
3,395,037	+		SMc03280	0.60	-0.4
3,395,038	-		SMc03280	0.60	-1.1
3,395,038	-		SMc03280	0.60	-0.4
3,395,115	-		SMc03280	0.70	-0.5
3,395,357	+		SMc03281	0.20	-2.0
3,395,358	-		SMc03281	0.20	-1.1
3,395,414	+		SMc03281	0.28	+0.0
3,395,415	-		SMc03281	0.28	-0.2
3,395,415	-		SMc03281	0.28	+0.4
3,395,415	-		SMc03281	0.28	+0.1
3,395,415	-		SMc03281	0.28	-0.1
3,395,415	-		SMc03281	0.28	-1.0
3,395,622	+		SMc03281	0.56	-0.1
3,395,646	+		SMc03281	0.59	+1.0
3,395,646	+		SMc03281	0.59	-0.2
3,395,926	+				+1.4
3,395,927	-				-0.2
3,395,927	-				+0.2
3,395,966	-				+0.1
3,395,989	+				+0.4
3,395,989	+				+1.8
3,395,989	+				-0.2
3,395,989	+				-0.1
3,395,989	+				+1.0
3,395,990	-				+0.8
3,395,990	-				-0.5
3,395,990	-				-1.8
3,395,990	-				-0.1
3,395,993	+				+1.7
3,395,994	-				+1.5
3,396,313	+		SMc03282	0.24	+0.8
3,396,314	-		SMc03282	0.24	-0.1
3,396,314	-		SMc03282	0.24	-0.1