Strain Fitness in Sinorhizobium meliloti 1021 around SMc02758
Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) |
---|---|---|---|---|---|
remove | |||||
41,282 | - | -0.5 | |||
41,367 | - | SMc02758 | 0.18 | -1.9 | |
41,852 | + | SMc02758 | 0.84 | -1.4 | |
41,853 | - | SMc02758 | 0.84 | -0.2 | |
41,853 | - | SMc02758 | 0.84 | +0.4 | |
41,876 | - | SMc02758 | 0.87 | +0.0 | |
42,012 | + | -0.1 | |||
42,236 | + | SMc02757 | 0.17 | -2.7 | |
42,237 | - | SMc02757 | 0.17 | -0.7 | |
42,311 | + | SMc02757 | 0.22 | -1.4 | |
42,312 | - | SMc02757 | 0.22 | -1.3 | |
42,477 | - | SMc02757 | 0.33 | +1.5 | |
42,527 | + | SMc02757 | 0.37 | +0.5 | |
42,671 | + | SMc02757 | 0.46 | -0.5 | |
42,860 | + | SMc02757 | 0.58 | -0.3 | |
42,861 | - | SMc02757 | 0.59 | +0.2 | |
42,861 | - | SMc02757 | 0.59 | +0.6 | |
42,861 | - | SMc02757 | 0.59 | -1.7 | |
42,879 | + | SMc02757 | 0.60 | -0.9 | |
42,879 | + | SMc02757 | 0.60 | -0.3 | |
42,880 | - | SMc02757 | 0.60 | -0.7 | |
42,880 | - | SMc02757 | 0.60 | -0.6 | |
42,880 | - | SMc02757 | 0.60 | -0.9 |
Or see this region's nucleotide sequence