Strain Fitness in Sinorhizobium meliloti 1021 around SMc01830

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
2,655,683	+		SMc01829	0.81	-0.5
2,656,593	+				-0.3
2,656,593	+				-0.4
2,656,594	-				-1.5
2,656,594	-				+1.0
2,656,594	-				-0.1
2,656,605	+				-0.2
2,656,667	-		SMc01830	0.10	-0.5
2,656,667	-				+0.4
2,656,743	+		SMc01830	0.23	+0.3
2,656,845	+		SMc01830	0.39	+0.3
2,657,082	+		SMc01830	0.78	-0.2
2,657,082	+		SMc01830	0.78	+0.2
2,657,083	-		SMc01830	0.78	+0.8
2,657,083	-		SMc01830	0.78	+0.1
2,657,083	-		SMc01830	0.78	+0.1
2,657,083	-		SMc01830	0.78	+0.0
2,657,113	-		SMc01830	0.83	+1.5
2,657,224	-				-0.6
2,657,253	+				-0.6
2,657,280	-				+0.5
2,657,280	-				-0.7
2,657,460	-		SMc01831	0.31	+0.6
2,657,713	-		SMc01831	0.69	-0.1
2,657,882	-				-0.2
2,657,906	-				-0.1
2,657,930	-				-0.1
2,657,930	-				+0.7
2,658,148	+		SMc01832	0.50	+0.5