Strain Fitness in Sinorhizobium meliloti 1021 around SMc01622

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
2,411,952	-		SMc01620	0.88	-1.0
2,411,952	-		SMc01620	0.88	-1.2
2,411,965	+		SMc01620	0.89	-0.9
2,411,965	+		SMc01620	0.89	-1.7
2,412,201	+				+0.1
2,412,202	-				+0.9
2,412,202	-				+0.4
2,412,279	+		SMc01621	0.17	-0.5
2,412,280	-		SMc01621	0.17	-0.6
2,412,282	+		SMc01621	0.18	-0.4
2,412,283	-		SMc01621	0.18	-0.4
2,412,486	+		SMc01621	0.48	-0.7
2,412,486	+		SMc01621	0.48	-0.6
2,412,486	+		SMc01621	0.48	-0.2
2,412,486	+		SMc01621	0.48	-1.3
2,412,487	-		SMc01621	0.48	-0.0
2,412,487	-		SMc01621	0.48	-0.6
2,412,548	-		SMc01621	0.57	+0.0
2,412,745	+		SMc01621	0.87	-1.2
2,412,745	+		SMc01621	0.87	-0.6
2,412,912	+				-1.8
2,412,912	+				-3.5
2,412,912	+				-3.2
2,412,913	-				-0.9
2,412,913	-				-2.1
2,412,913	-				-0.7
2,412,913	-				-0.3
2,412,913	-				-0.4
2,412,941	+				-2.6
2,412,942	-				-1.2
2,412,942	-				-0.9
2,412,942	-				-0.8
2,412,943	+				-3.0
2,412,944	-				-0.6
2,412,944	-				-0.3
2,413,269	+		SMc01622	0.41	-3.6
2,413,270	-		SMc01622	0.41	-0.2
2,413,270	-		SMc01622	0.41	-1.0
2,413,270	-		SMc01622	0.41	-1.3
2,413,270	-		SMc01622	0.41	-0.9
2,413,270	-		SMc01622	0.41	+0.3
2,413,520	-		SMc01622	0.65	-1.7
2,413,565	-		SMc01622	0.70	-0.6
2,413,708	-		SMc01622	0.83	-1.3
2,413,787	+				-2.4
2,413,787	+				-4.2
2,413,787	+				-3.7
2,413,787	+				-1.7
2,413,787	+				-2.2
2,413,787	+				-0.3
2,413,788	-				-1.4
2,413,788	-				-2.1
2,413,788	-				-0.7
2,413,788	-				-0.6
2,413,964	+				-0.0
2,413,965	-				-0.0
2,413,986	-				-0.0
2,413,986	-				+0.0
2,414,072	+		SMc01623	0.12	-0.3
2,414,072	+				-1.9
2,414,073	-		SMc01623	0.12	+0.8
2,414,073	-		SMc01623	0.12	-0.3
2,414,246	+		SMc01623	0.23	-0.7
2,414,246	+		SMc01623	0.23	+1.0
2,414,247	-		SMc01623	0.24	+0.3
2,414,247	-				-1.4
2,414,247	-		SMc01623	0.24	+0.1
2,414,385	+		SMc01623	0.32	-0.7
2,414,386	-		SMc01623	0.32	-0.5
2,414,386	-		SMc01623	0.32	+0.5
2,414,387	+		SMc01623	0.32	-0.3
2,414,558	+		SMc01623	0.43	+0.6
2,414,559	-		SMc01623	0.43	+0.3
2,414,559	-		SMc01623	0.43	-0.2
2,414,662	+		SMc01623	0.50	+0.2
2,414,662	+		SMc01623	0.50	-0.1
2,414,663	-		SMc01623	0.50	-0.3
2,414,663	-		SMc01623	0.50	-0.2
2,414,663	-		SMc01623	0.50	-0.1
2,414,696	+		SMc01623	0.52	-0.4
2,414,696	+		SMc01623	0.52	-0.0
2,414,735	+		SMc01623	0.54	+0.4