Strain Fitness in Sinorhizobium meliloti 1021 around SMc01494

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
2,279,895	-				+0.7
2,279,895	-				-0.2
2,279,901	+				+0.3
2,279,902	-				-1.1
2,279,902	-				-0.6
2,279,971	+				-0.2
2,279,983	+				+0.6
2,279,983	+				-0.7
2,280,008	+				+0.4
2,280,919	-				-4.2
2,280,991	+		SMc01494	0.11	-4.7
2,280,992	-		SMc01494	0.11	-5.0
2,281,026	-		SMc01494	0.15	-4.8
2,281,026	-		SMc01494	0.15	-4.4
2,281,331	+		SMc01494	0.49	-1.2
2,281,332	-		SMc01494	0.50	-5.3
2,281,342	-		SMc01494	0.51	-5.8
2,281,342	-		SMc01494	0.51	-5.4
2,281,399	+		SMc01494	0.57	-2.5
2,281,399	+		SMc01494	0.57	-6.5
2,281,400	-		SMc01494	0.57	-2.5
2,281,400	-		SMc01494	0.57	-4.4
2,281,400	-		SMc01494	0.57	-4.1
2,281,664	+		SMc01494	0.87	-3.2
2,281,710	+				-4.9
2,281,741	+				-3.9
2,282,349	+				+0.1
2,282,350	-				-0.5
2,282,384	+				-0.3
2,282,581	+		SMc01438	0.13	-0.4
2,282,582	-		SMc01438	0.13	+1.5