Strain Fitness in Sinorhizobium meliloti 1021 around SMc00608

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
1,277,288	-		SMc00606	0.45	-0.0
1,277,288	-		SMc00606	0.45	-0.0
1,277,308	-		SMc00606	0.48	+0.2
1,277,358	+		SMc00606	0.54	-0.4
1,277,358	+		SMc00606	0.54	-0.1
1,277,359	-		SMc00606	0.54	-0.2
1,277,359	-		SMc00606	0.54	-1.0
1,277,499	+		SMc00606	0.73	-0.2
1,277,499	+		SMc00606	0.73	+0.1
1,277,499	+		SMc00606	0.73	-0.3
1,277,500	-		SMc00606	0.73	-0.2
1,277,500	-		SMc00606	0.73	-0.9
1,277,792	+				+0.7
1,277,792	+				-0.1
1,277,792	+				-0.8
1,277,793	-				-1.8
1,277,793	-				-0.5
1,277,793	-				+0.3
1,277,793	-				-0.0
1,277,793	-				-0.0
1,277,826	+		SMc00607	0.15	-0.2
1,277,827	-		SMc00607	0.16	-0.2
1,277,915	+		SMc00607	0.35	-0.2
1,277,915	+		SMc00607	0.35	+1.4
1,277,916	-		SMc00607	0.36	+0.1
1,277,921	+		SMc00607	0.37	+0.1
1,277,922	-		SMc00607	0.37	+1.3
1,277,945	+		SMc00607	0.42	-0.0
1,278,014	+		SMc00607	0.58	-1.0
1,278,014	+		SMc00607	0.58	-1.8
1,278,029	+		SMc00607	0.61	-1.8
1,278,089	+		SMc00607	0.75	-0.5
1,278,089	+		SMc00607	0.75	-0.4
1,278,206	-				-0.4
1,278,206	-				-0.1
1,278,531	-		SMc00608	0.32	+0.4
1,278,542	+		SMc00608	0.33	+0.2
1,278,542	+		SMc00608	0.33	-1.1
1,278,542	+		SMc00608	0.33	+0.4
1,278,543	-		SMc00608	0.33	+1.2
1,278,543	-		SMc00608	0.33	+0.1
1,278,599	+		SMc00608	0.40	-0.1
1,278,599	+		SMc00608	0.40	+1.2
1,278,599	+		SMc00608	0.40	+0.8
1,278,600	-		SMc00608	0.40	+0.7
1,278,875	+		SMc00608	0.71	-1.3
1,278,876	-		SMc00608	0.72	+0.0
1,278,876	-		SMc00608	0.72	-0.2
1,278,876	-		SMc00608	0.72	+0.7
1,278,876	-		SMc00608	0.72	-0.1
1,278,876	-		SMc00608	0.72	+1.6
1,278,983	+		SMc00608	0.84	+0.3
1,278,983	+		SMc00608	0.84	-0.1
1,279,103	+				+0.9
1,279,103	+				+0.2
1,279,103	+				-0.2
1,279,104	-				-0.3
1,279,116	-				+0.1
1,279,122	+				-0.0
1,279,197	+				+1.9
1,279,198	-				+0.7
1,279,199	+				-1.0
1,279,199	+				-0.8
1,279,199	+				+0.7
1,279,200	-				-0.1
1,279,200	-				-0.9
1,279,200	-				-0.2
1,279,200	-				+0.4
1,279,200	-				+0.1
1,279,202	-				+0.3
1,279,330	+				-0.2
1,279,353	+				-0.4
1,279,353	+				-0.3
1,279,389	+				-0.1
1,279,390	-				+0.6
1,279,400	+				-0.3
1,279,400	+				-0.2
1,279,400	+				+0.9
1,279,400	+				+0.2
1,279,401	-				+0.2
1,279,404	+				+0.4
1,279,404	+				-0.1
1,279,405	-				+0.6
1,279,405	-				+0.0
1,279,405	-				+0.9
1,279,558	-		SMc00609	0.17	-0.6
1,279,563	+		SMc00609	0.17	+0.9
1,279,564	-		SMc00609	0.17	+0.3
1,279,564	-		SMc00609	0.17	+0.3
1,279,626	+		SMc00609	0.20	-0.3
1,279,626	+		SMc00609	0.20	-0.0
1,279,627	-		SMc00609	0.20	+1.8
1,279,627	-		SMc00609	0.20	-1.9
1,279,843	-		SMc00609	0.30	+0.3
1,279,962	+		SMc00609	0.36	+1.1
1,279,962	+		SMc00609	0.36	-0.9
1,279,962	+		SMc00609	0.36	+0.5
1,280,106	+		SMc00609	0.42	-0.4
1,280,107	-		SMc00609	0.42	+0.9
1,280,107	-		SMc00609	0.42	+0.6
1,280,107	-		SMc00609	0.42	-0.1
1,280,107	-		SMc00609	0.42	+0.6