Strain Fitness in Sinorhizobium meliloti 1021 around SMc00302

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
1,873,746	-		SMc00300	0.88	-0.5
1,873,746	-		SMc00300	0.88	+0.4
1,873,746	-		SMc00300	0.88	-0.3
1,873,843	-				+0.2
1,873,863	+				+0.8
1,873,863	+				+0.4
1,873,863	+				-0.3
1,873,864	-				-0.4
1,873,864	-				+0.2
1,873,930	-				+0.1
1,873,938	-				+1.0
1,874,033	-				-0.1
1,874,069	-				-0.0
1,874,512	-				-2.5
1,874,525	+				-0.4
1,874,544	-				-0.3
1,874,583	+				-3.0
1,874,583	+				-0.0
1,874,583	+				-0.1
1,874,584	-				-0.2
1,874,584	-				-0.2
1,874,835	+		SMc00302	0.56	-3.2
1,874,836	-		SMc00302	0.56	-1.9