Strain Fitness in Sinorhizobium meliloti 1021 around SMc00235

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
1,802,236	+				-1.4
1,802,572	-		SMc00235	0.26	-2.4
1,802,572	-		SMc00235	0.26	-1.6
1,802,575	+		SMc00235	0.26	-3.4
1,802,575	+		SMc00235	0.26	-1.2
1,802,575	+		SMc00235	0.26	-2.9
1,802,575	+		SMc00235	0.26	-2.2
1,802,576	-		SMc00235	0.26	-1.4
1,803,117	+		SMc00235	0.80	+1.4
1,803,206	+		SMc00235	0.89	-2.1
1,803,206	+		SMc00235	0.89	-1.4
1,803,206	+		SMc00235	0.89	-0.9
1,803,207	-		SMc00235	0.89	-1.4
1,803,362	-				+0.4
1,803,363	+				-1.8
1,803,364	-				+1.4
1,803,713	-		SMc00236	0.47	-1.2
1,803,713	-		SMc00236	0.47	-2.1
1,804,001	+		SMc00236	0.82	-0.6
1,804,002	-		SMc00236	0.82	-3.4
1,804,002	-		SMc00236	0.82	-2.2
1,804,088	+				+1.4
1,804,169	+				+0.2
1,804,170	-				-0.3