Strain Fitness in Sinorhizobium meliloti 1021 around SMa1935

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
1,098,592	+				-0.1
1,098,592	+				+0.5
1,098,592	+				-0.2
1,098,593	-				-0.4
1,098,788	-				-0.3
1,098,953	+				-0.9
1,098,954	-		SMa1933	0.26	-0.7
1,098,954	-		SMa1933	0.26	+0.4
1,099,225	-		SMa1933	0.68	+0.2
1,099,432	+				-0.9
1,099,432	+				+0.7
1,099,432	+				+1.1
1,099,440	-				+0.1
1,099,468	+				+1.5
1,099,494	+				+0.3
1,099,494	+				-0.2
1,099,495	-				-2.6
1,099,607	-				-0.3
1,099,616	-				-0.4
1,099,787	-		SMa1935	0.32	-2.0
1,100,006	+		SMa1935	0.66	+0.1
1,100,006	+		SMa1935	0.66	-2.2
1,100,007	-		SMa1935	0.67	+0.6
1,100,007	-		SMa1935	0.67	+0.1
1,100,035	-		SMa1935	0.71	-0.1
1,100,063	-		SMa1935	0.75	-1.1
1,100,309	+				-0.6
1,100,668	+		SMa1937	0.36	-0.0
1,100,668	+		SMa1937	0.36	+0.1
1,100,755	-		SMa1937	0.43	+0.1
1,100,875	+		SMa1937	0.53	-0.2
1,100,876	-		SMa1937	0.53	-0.5
1,101,029	-		SMa1937	0.66	+0.3
1,101,114	-		SMa1937	0.72	+0.5
1,101,135	+		SMa1937	0.74	+0.1