Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
SMa1635: SMa1635 - hypothetical protein, at 910,181 to 910,639
SMa1635
Position (kb)
910
911 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 909.212 kb on + strand at 909.411 kb on + strand at 909.411 kb on + strand at 909.412 kb on - strand at 909.412 kb on - strand at 909.413 kb on + strand at 909.413 kb on + strand at 909.413 kb on + strand at 909.414 kb on - strand at 909.414 kb on - strand at 909.419 kb on - strand at 909.535 kb on + strand at 909.597 kb on + strand at 909.612 kb on + strand at 909.613 kb on - strand at 909.733 kb on + strand at 909.734 kb on - strand at 909.735 kb on + strand at 909.735 kb on + strand at 909.735 kb on + strand at 909.736 kb on - strand at 909.926 kb on + strand at 909.927 kb on - strand at 909.927 kb on - strand at 909.977 kb on + strand at 909.978 kb on - strand at 909.978 kb on - strand at 909.978 kb on - strand at 910.002 kb on + strand at 910.094 kb on - strand at 910.095 kb on + strand at 910.095 kb on + strand at 910.095 kb on + strand at 910.095 kb on + strand at 910.096 kb on - strand at 910.187 kb on + strand at 910.330 kb on + strand, within SMa1635 at 910.927 kb on + strand at 911.056 kb on + strand at 911.069 kb on - strand at 911.089 kb on + strand at 911.115 kb on - strand at 911.141 kb on - strand at 911.172 kb on + strand at 911.217 kb on + strand at 911.217 kb on + strand at 911.217 kb on + strand at 911.218 kb on - strand at 911.218 kb on - strand at 911.246 kb on - strand at 911.255 kb on + strand at 911.256 kb on - strand at 911.279 kb on + strand at 911.389 kb on + strand at 911.390 kb on - strand at 911.397 kb on + strand at 911.398 kb on - strand at 911.408 kb on - strand at 911.534 kb on - strand at 911.619 kb on - strand at 911.620 kb on + strand at 911.620 kb on + strand at 911.621 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) remove 909,212 + +0.1 909,411 + -0.1 909,411 + +1.3 909,412 - -0.1 909,412 - +0.1 909,413 + +1.7 909,413 + +0.3 909,413 + -0.6 909,414 - -0.7 909,414 - -0.8 909,419 - +0.1 909,535 + -0.1 909,597 + +0.9 909,612 + -0.2 909,613 - -0.3 909,733 + -0.0 909,734 - -0.9 909,735 + -0.5 909,735 + -0.1 909,735 + +1.0 909,736 - -2.6 909,926 + +0.0 909,927 - -2.6 909,927 - +0.2 909,977 + +0.4 909,978 - +0.6 909,978 - +0.1 909,978 - +1.3 910,002 + -0.1 910,094 - -1.6 910,095 + +0.1 910,095 + +0.4 910,095 + -0.3 910,095 + +0.8 910,096 - -0.3 910,187 + +0.2 910,330 + SMa1635 0.32 -3.8 910,927 + -0.1 911,056 + -0.3 911,069 - +0.1 911,089 + -0.9 911,115 - -1.5 911,141 - -0.1 911,172 + +0.1 911,217 + -0.9 911,217 + +0.3 911,217 + -0.3 911,218 - +0.3 911,218 - +0.4 911,246 - -0.0 911,255 + +0.2 911,256 - -1.2 911,279 + +0.3 911,389 + -1.1 911,390 - +0.0 911,397 + +0.4 911,398 - +0.7 911,408 - -1.3 911,534 - +0.2 911,619 - -0.1 911,620 + +0.1 911,620 + +0.1 911,621 - +0.1
Or see this region's nucleotide sequence