Strain Fitness in Sinorhizobium meliloti 1021 around SMa0017

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
10,888	+		SMa0015	0.82	-0.4
10,889	-		SMa0015	0.82	-0.1
10,889	-		SMa0015	0.82	+0.2
10,889	-		SMa0015	0.82	+0.3
11,163	+				-0.0
11,267	-				+0.1
11,267	-				-0.0
11,270	+				-0.2
11,270	+				+0.3
11,271	-				-0.4
11,271	-				-0.1
11,271	-				+0.2
11,379	+				+0.9
11,379	+				+1.5
11,407	-				+0.3
11,442	+				+0.7
11,462	-				+0.2
11,493	+				-0.7
11,503	+				-0.7
11,685	+		SMa0017	0.32	+0.4
11,685	+		SMa0017	0.32	+1.2
11,685	+		SMa0017	0.32	+0.6
11,685	+		SMa0017	0.32	+1.2
11,686	-		SMa0017	0.32	-0.7
11,835	+		SMa0017	0.59	-0.1
11,978	+		SMa0017	0.85	+0.7
11,978	+		SMa0017	0.85	+0.2
11,978	+		SMa0017	0.85	-0.6
11,978	+		SMa0017	0.85	+0.0
12,083	-				+0.0
12,201	+				-0.2
12,202	-				-0.8
12,218	-				+0.8
12,221	+				-0.0
12,221	+				+0.3
12,222	-				+0.2
12,222	-				+0.1
12,222	-				-0.1
12,222	-				+0.2
12,222	-				+0.1
12,361	+		SMa5000	0.35	-1.4
12,361	+		SMa5000	0.35	-0.1
12,362	-		SMa5000	0.36	+1.0
12,411	+		SMa5000	0.53	-0.8
12,411	+		SMa5000	0.53	+0.1
12,411	+		SMa5000	0.53	-0.6
12,411	+		SMa5000	0.53	-0.3
12,415	+		SMa5000	0.54	+0.5
12,416	-		SMa5000	0.55	-0.5
12,416	-		SMa5000	0.55	-0.2
12,532	+				+0.3
12,533	-				-1.7
12,578	+				-0.1
12,585	+				-0.6
12,640	+				+0.2
12,641	-				-0.5
12,676	-				+0.8