Strain Fitness in Sinorhizobium meliloti 1021 around SM_b21635

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
1,662,393	+				+1.8
1,662,487	+				-0.2
1,662,664	+		SM_b21634	0.35	+0.1
1,662,751	+		SM_b21634	0.53	+0.4
1,662,751	+		SM_b21634	0.53	+0.6
1,662,752	-		SM_b21634	0.53	+0.6
1,662,839	-		SM_b21634	0.70	+0.2
1,663,025	+				-0.4
1,663,025	+				+0.2
1,663,025	+				-0.9
1,663,025	+				-0.7
1,663,025	+				-0.6
1,663,026	-				-1.4
1,663,026	-				-0.1
1,663,026	-				-0.1
1,663,026	-				+1.8
1,663,026	-				-0.6
1,663,033	-				+0.0
1,663,159	-				-0.2
1,663,159	-				-0.1
1,663,195	-		SM_b21635	0.10	-1.1
1,663,204	-		SM_b21635	0.11	+0.7
1,663,260	+		SM_b21635	0.13	-0.1
1,663,260	+		SM_b21635	0.13	-0.1
1,663,333	+		SM_b21635	0.17	+0.1
1,663,333	+		SM_b21635	0.17	+0.1
1,663,334	-		SM_b21635	0.17	-0.4
1,663,539	+		SM_b21635	0.27	+0.3
1,663,540	-		SM_b21635	0.27	-0.4
1,663,796	-		SM_b21635	0.39	-0.2
1,663,800	+		SM_b21635	0.39	+1.3
1,663,801	-		SM_b21635	0.39	-0.2
1,663,875	+		SM_b21635	0.43	+0.9
1,663,875	+		SM_b21635	0.43	-0.3
1,664,288	-		SM_b21635	0.63	-0.5
1,664,605	+		SM_b21635	0.78	-0.2
1,664,606	-		SM_b21635	0.78	-0.3
1,664,703	+		SM_b21635	0.83	+0.9
1,664,784	+		SM_b21635	0.87	-2.3
1,664,892	+				-0.1
1,664,892	+				-0.6
1,664,893	-				+0.0
1,664,893	-				-1.3
1,665,010	+				-2.4
1,665,012	+				-0.9
1,665,114	-				-0.3
1,665,165	-				-0.0
1,665,165	-				+0.6
1,665,182	+				+0.8
1,665,182	+				-0.4
1,665,183	-				+1.7
1,665,741	-		SM_b21636	0.59	+0.5
1,665,741	-		SM_b21636	0.59	+1.3
1,665,787	+		SM_b21636	0.64	+0.4
1,666,011	-		SM_b21636	0.84	+0.7