Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20059
Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) |
|---|---|---|---|---|---|
| remove | |||||
| 68,723 | + | +1.3 | |||
| 69,594 | + | +0.1 | |||
| 69,595 | - | +0.3 | |||
| 69,857 | - | SM_b20059 | 0.39 | -0.6 | |
| 69,897 | + | SM_b20059 | 0.44 | +0.5 | |
| 69,897 | + | SM_b20059 | 0.44 | +2.0 | |
| 69,898 | - | SM_b20059 | 0.44 | -0.4 | |
| 69,898 | - | SM_b20059 | 0.44 | -0.5 | |
| 69,898 | - | SM_b20059 | 0.44 | +0.3 | |
| 70,096 | - | SM_b20059 | 0.70 | -0.3 | |
| 70,210 | + | SM_b20059 | 0.84 | +0.1 | |
| 70,210 | + | SM_b20059 | 0.84 | -1.0 | |
| 70,210 | + | SM_b20059 | 0.84 | -0.1 | |
| 70,330 | - | +0.1 |
Or see this region's nucleotide sequence