Experiment: Cobalt chloride 0.06 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0672 and Psest_0673 are separated by 204 nucleotides Psest_0673 and Psest_0674 are separated by 107 nucleotides Psest_0674 and Psest_0675 are separated by 1 nucleotides
Psest_0672: Psest_0672 - Alcohol dehydrogenase, class IV, at 733,496 to 734,644
_0672
Psest_0673: Psest_0673 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase, at 734,849 to 736,198
_0673
Psest_0674: Psest_0674 - polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases, at 736,306 to 736,935
_0674
Psest_0675: Psest_0675 - Predicted periplasmic lipoprotein, at 736,937 to 737,227
_0675
Position (kb) 734
735
736
737 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 733.866 kb on + strand, within Psest_0672 at 733.867 kb on - strand, within Psest_0672 at 733.867 kb on - strand, within Psest_0672 at 733.914 kb on + strand, within Psest_0672 at 733.914 kb on + strand, within Psest_0672 at 733.915 kb on - strand, within Psest_0672 at 733.915 kb on - strand, within Psest_0672 at 734.040 kb on + strand, within Psest_0672 at 734.040 kb on + strand, within Psest_0672 at 734.040 kb on + strand, within Psest_0672 at 734.040 kb on + strand, within Psest_0672 at 734.040 kb on + strand, within Psest_0672 at 734.040 kb on + strand, within Psest_0672 at 734.040 kb on + strand, within Psest_0672 at 734.041 kb on - strand, within Psest_0672 at 734.041 kb on - strand, within Psest_0672 at 734.041 kb on - strand, within Psest_0672 at 734.041 kb on - strand, within Psest_0672 at 734.171 kb on + strand, within Psest_0672 at 734.289 kb on + strand, within Psest_0672 at 734.289 kb on + strand, within Psest_0672 at 734.300 kb on - strand, within Psest_0672 at 734.562 kb on + strand at 734.562 kb on + strand at 734.562 kb on + strand at 734.563 kb on - strand at 734.563 kb on - strand at 734.854 kb on + strand at 734.861 kb on - strand at 735.086 kb on + strand, within Psest_0673 at 735.086 kb on + strand, within Psest_0673 at 735.086 kb on + strand, within Psest_0673 at 735.087 kb on - strand, within Psest_0673 at 735.111 kb on - strand, within Psest_0673 at 735.332 kb on + strand, within Psest_0673 at 735.827 kb on + strand, within Psest_0673 at 735.828 kb on - strand, within Psest_0673 at 735.828 kb on - strand, within Psest_0673 at 735.828 kb on - strand, within Psest_0673 at 735.828 kb on - strand, within Psest_0673 at 735.828 kb on - strand, within Psest_0673 at 735.898 kb on + strand, within Psest_0673 at 735.898 kb on + strand, within Psest_0673 at 736.067 kb on - strand at 736.236 kb on + strand at 736.236 kb on + strand at 736.236 kb on + strand at 736.256 kb on + strand at 736.917 kb on + strand at 737.039 kb on + strand, within Psest_0675 at 737.039 kb on + strand, within Psest_0675 at 737.039 kb on + strand, within Psest_0675 at 737.039 kb on + strand, within Psest_0675 at 737.040 kb on - strand, within Psest_0675 at 737.040 kb on - strand, within Psest_0675 at 737.121 kb on - strand, within Psest_0675 at 737.121 kb on - strand, within Psest_0675
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.06 mM remove 733,866 + Psest_0672 0.32 -0.3 733,867 - Psest_0672 0.32 +1.3 733,867 - Psest_0672 0.32 +1.5 733,914 + Psest_0672 0.36 +1.8 733,914 + Psest_0672 0.36 +1.0 733,915 - Psest_0672 0.36 -0.1 733,915 - Psest_0672 0.36 +0.2 734,040 + Psest_0672 0.47 +1.1 734,040 + Psest_0672 0.47 +1.2 734,040 + Psest_0672 0.47 +0.9 734,040 + Psest_0672 0.47 +0.7 734,040 + Psest_0672 0.47 -1.5 734,040 + Psest_0672 0.47 +0.3 734,040 + Psest_0672 0.47 -2.8 734,041 - Psest_0672 0.47 +0.8 734,041 - Psest_0672 0.47 +1.0 734,041 - Psest_0672 0.47 +1.3 734,041 - Psest_0672 0.47 -0.4 734,171 + Psest_0672 0.59 +1.1 734,289 + Psest_0672 0.69 -0.8 734,289 + Psest_0672 0.69 -0.2 734,300 - Psest_0672 0.70 +0.3 734,562 + +1.9 734,562 + -0.3 734,562 + -0.3 734,563 - -1.2 734,563 - -0.3 734,854 + +0.4 734,861 - +0.0 735,086 + Psest_0673 0.18 -1.4 735,086 + Psest_0673 0.18 -2.7 735,086 + Psest_0673 0.18 -0.9 735,087 - Psest_0673 0.18 +0.9 735,111 - Psest_0673 0.19 -0.3 735,332 + Psest_0673 0.36 -1.1 735,827 + Psest_0673 0.72 -1.0 735,828 - Psest_0673 0.73 +1.8 735,828 - Psest_0673 0.73 +0.2 735,828 - Psest_0673 0.73 -1.0 735,828 - Psest_0673 0.73 -0.4 735,828 - Psest_0673 0.73 -0.0 735,898 + Psest_0673 0.78 -0.7 735,898 + Psest_0673 0.78 -2.5 736,067 - +1.8 736,236 + +0.0 736,236 + +0.6 736,236 + +0.0 736,256 + -2.1 736,917 + -2.8 737,039 + Psest_0675 0.35 +1.5 737,039 + Psest_0675 0.35 +0.2 737,039 + Psest_0675 0.35 +1.6 737,039 + Psest_0675 0.35 -1.9 737,040 - Psest_0675 0.35 -1.5 737,040 - Psest_0675 0.35 -1.5 737,121 - Psest_0675 0.63 +1.4 737,121 - Psest_0675 0.63 -1.8
Or see this region's nucleotide sequence