Experiment: Cobalt chloride 0.06 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0167 and Psest_0168 are separated by 1 nucleotides Psest_0168 and Psest_0169 are separated by 197 nucleotides Psest_0169 and Psest_0170 are separated by 28 nucleotides Psest_0170 and Psest_0172 are separated by 218 nucleotides Psest_0172 and Psest_0173 overlap by 4 nucleotides Psest_0173 and Psest_0174 are separated by 129 nucleotides
Psest_0167: Psest_0167 - Flagellar basal body-associated protein, at 164,782 to 165,183
_0167
Psest_0168: Psest_0168 - Uncharacterized conserved protein, at 165,185 to 165,634
_0168
Psest_0169: Psest_0169 - hypothetical protein, at 165,832 to 165,984
_0169
Psest_0170: Psest_0170 - 5,10-methenyltetrahydrofolate synthetase, at 166,013 to 166,615
_0170
Psest_0172: Psest_0172 - Uncharacterized protein conserved in bacteria, at 166,834 to 167,148
_0172
Psest_0173: Psest_0173 - TIGR02449 family protein, at 167,145 to 167,354
_0173
Psest_0174: Psest_0174 - Uncharacterized protein conserved in bacteria, at 167,484 to 168,038
_0174
Position (kb) 166
167 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 165.135 kb on + strand, within Psest_0167 at 165.136 kb on - strand, within Psest_0167 at 165.486 kb on + strand, within Psest_0168 at 165.486 kb on + strand, within Psest_0168 at 165.487 kb on - strand, within Psest_0168 at 165.487 kb on - strand, within Psest_0168 at 165.487 kb on - strand, within Psest_0168 at 165.487 kb on - strand, within Psest_0168 at 165.487 kb on - strand, within Psest_0168 at 165.514 kb on + strand, within Psest_0168 at 165.514 kb on + strand, within Psest_0168 at 165.514 kb on + strand, within Psest_0168 at 165.515 kb on - strand, within Psest_0168 at 165.515 kb on - strand, within Psest_0168 at 165.541 kb on - strand, within Psest_0168 at 165.549 kb on - strand, within Psest_0168 at 165.627 kb on + strand at 165.703 kb on + strand at 165.703 kb on + strand at 165.703 kb on + strand at 165.704 kb on - strand at 165.704 kb on - strand at 165.704 kb on - strand at 165.750 kb on - strand at 165.750 kb on - strand at 165.769 kb on + strand at 165.769 kb on + strand at 165.777 kb on + strand at 165.777 kb on + strand at 165.840 kb on + strand at 165.840 kb on + strand at 165.840 kb on + strand at 165.840 kb on + strand at 165.841 kb on - strand at 165.849 kb on + strand, within Psest_0169 at 165.903 kb on + strand, within Psest_0169 at 166.023 kb on + strand at 166.023 kb on + strand at 166.058 kb on + strand at 166.058 kb on + strand at 166.058 kb on + strand at 166.059 kb on - strand at 166.059 kb on - strand at 166.059 kb on - strand at 166.059 kb on - strand at 166.059 kb on - strand at 166.173 kb on + strand, within Psest_0170 at 166.174 kb on - strand, within Psest_0170 at 166.174 kb on - strand, within Psest_0170 at 166.174 kb on - strand, within Psest_0170 at 166.174 kb on - strand, within Psest_0170 at 166.174 kb on - strand, within Psest_0170 at 166.174 kb on - strand, within Psest_0170 at 166.174 kb on - strand, within Psest_0170 at 166.174 kb on - strand, within Psest_0170 at 166.383 kb on + strand, within Psest_0170 at 166.383 kb on + strand, within Psest_0170 at 166.383 kb on + strand, within Psest_0170 at 166.383 kb on + strand, within Psest_0170 at 166.383 kb on + strand, within Psest_0170 at 166.384 kb on - strand, within Psest_0170 at 166.384 kb on - strand, within Psest_0170 at 166.384 kb on - strand, within Psest_0170 at 166.456 kb on - strand, within Psest_0170 at 166.456 kb on - strand, within Psest_0170 at 166.456 kb on - strand, within Psest_0170 at 166.649 kb on + strand at 166.650 kb on - strand at 166.683 kb on + strand at 166.695 kb on + strand at 166.696 kb on - strand at 166.696 kb on - strand at 166.731 kb on + strand at 166.731 kb on + strand at 166.731 kb on + strand at 166.731 kb on + strand at 166.731 kb on + strand at 166.732 kb on - strand at 166.732 kb on - strand at 166.732 kb on - strand at 166.732 kb on - strand at 166.737 kb on + strand at 166.737 kb on + strand at 166.749 kb on + strand at 166.750 kb on - strand at 166.809 kb on + strand at 166.809 kb on + strand at 166.809 kb on + strand at 166.809 kb on + strand at 166.810 kb on - strand at 166.810 kb on - strand at 166.810 kb on - strand at 166.810 kb on - strand at 166.810 kb on - strand at 166.897 kb on + strand, within Psest_0172 at 166.897 kb on + strand, within Psest_0172 at 166.897 kb on + strand, within Psest_0172 at 166.897 kb on + strand, within Psest_0172 at 166.897 kb on + strand, within Psest_0172 at 166.897 kb on + strand, within Psest_0172 at 166.897 kb on + strand, within Psest_0172 at 166.897 kb on + strand, within Psest_0172 at 166.897 kb on + strand, within Psest_0172 at 166.898 kb on - strand, within Psest_0172 at 166.898 kb on - strand, within Psest_0172 at 166.898 kb on - strand, within Psest_0172 at 166.898 kb on - strand, within Psest_0172 at 166.898 kb on - strand, within Psest_0172 at 166.898 kb on - strand, within Psest_0172 at 166.898 kb on - strand, within Psest_0172 at 166.898 kb on - strand, within Psest_0172 at 166.898 kb on - strand, within Psest_0172 at 166.898 kb on - strand, within Psest_0172 at 166.898 kb on - strand, within Psest_0172 at 167.102 kb on + strand, within Psest_0172 at 167.102 kb on + strand, within Psest_0172 at 167.102 kb on + strand, within Psest_0172 at 167.103 kb on - strand at 167.103 kb on - strand, within Psest_0172 at 167.103 kb on - strand, within Psest_0172 at 167.433 kb on - strand at 167.433 kb on - strand at 167.454 kb on - strand at 167.454 kb on - strand at 167.454 kb on - strand at 167.454 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.06 mM remove 165,135 + Psest_0167 0.88 -0.9 165,136 - Psest_0167 0.88 +0.7 165,486 + Psest_0168 0.67 +0.8 165,486 + Psest_0168 0.67 -0.8 165,487 - Psest_0168 0.67 +0.1 165,487 - Psest_0168 0.67 +1.0 165,487 - Psest_0168 0.67 +0.1 165,487 - Psest_0168 0.67 -0.5 165,487 - Psest_0168 0.67 -0.4 165,514 + Psest_0168 0.73 +0.6 165,514 + Psest_0168 0.73 +2.2 165,514 + Psest_0168 0.73 +0.4 165,515 - Psest_0168 0.73 +0.7 165,515 - Psest_0168 0.73 -1.0 165,541 - Psest_0168 0.79 +0.7 165,549 - Psest_0168 0.81 -1.5 165,627 + -1.4 165,703 + -1.4 165,703 + +0.7 165,703 + -1.8 165,704 - -1.7 165,704 - -1.0 165,704 - -0.2 165,750 - -2.6 165,750 - +1.6 165,769 + -0.0 165,769 + -0.1 165,777 + +1.4 165,777 + -0.7 165,840 + -0.6 165,840 + -1.4 165,840 + -1.6 165,840 + +1.2 165,841 - +0.1 165,849 + Psest_0169 0.11 +1.0 165,903 + Psest_0169 0.46 +2.3 166,023 + +2.9 166,023 + +1.2 166,058 + -0.9 166,058 + -0.7 166,058 + -2.2 166,059 - -0.9 166,059 - -0.4 166,059 - -1.5 166,059 - -1.7 166,059 - +0.6 166,173 + Psest_0170 0.27 -0.5 166,174 - Psest_0170 0.27 +0.8 166,174 - Psest_0170 0.27 -1.4 166,174 - Psest_0170 0.27 -1.4 166,174 - Psest_0170 0.27 -1.7 166,174 - Psest_0170 0.27 -0.2 166,174 - Psest_0170 0.27 -3.2 166,174 - Psest_0170 0.27 +0.5 166,174 - Psest_0170 0.27 -1.5 166,383 + Psest_0170 0.61 -2.4 166,383 + Psest_0170 0.61 +0.2 166,383 + Psest_0170 0.61 +1.1 166,383 + Psest_0170 0.61 -2.4 166,383 + Psest_0170 0.61 -0.6 166,384 - Psest_0170 0.62 +0.8 166,384 - Psest_0170 0.62 -0.9 166,384 - Psest_0170 0.62 -0.5 166,456 - Psest_0170 0.73 -1.5 166,456 - Psest_0170 0.73 -1.1 166,456 - Psest_0170 0.73 -1.5 166,649 + +0.5 166,650 - +0.9 166,683 + -0.3 166,695 + +0.4 166,696 - +1.7 166,696 - +1.3 166,731 + -0.2 166,731 + +0.6 166,731 + -0.2 166,731 + -0.5 166,731 + -1.6 166,732 - -0.5 166,732 - +0.3 166,732 - -1.3 166,732 - -0.2 166,737 + +0.5 166,737 + +0.4 166,749 + -0.7 166,750 - +2.8 166,809 + +1.3 166,809 + -0.7 166,809 + -0.6 166,809 + +0.0 166,810 - -0.5 166,810 - -1.8 166,810 - +0.1 166,810 - -0.8 166,810 - -0.3 166,897 + Psest_0172 0.20 -0.2 166,897 + Psest_0172 0.20 -3.3 166,897 + Psest_0172 0.20 -1.1 166,897 + Psest_0172 0.20 +3.1 166,897 + Psest_0172 0.20 +2.4 166,897 + Psest_0172 0.20 +0.5 166,897 + Psest_0172 0.20 -1.6 166,897 + Psest_0172 0.20 +0.4 166,897 + Psest_0172 0.20 -1.0 166,898 - Psest_0172 0.20 +0.4 166,898 - Psest_0172 0.20 -0.6 166,898 - Psest_0172 0.20 -1.3 166,898 - Psest_0172 0.20 -0.0 166,898 - Psest_0172 0.20 +0.7 166,898 - Psest_0172 0.20 -0.1 166,898 - Psest_0172 0.20 +2.1 166,898 - Psest_0172 0.20 -1.9 166,898 - Psest_0172 0.20 +0.1 166,898 - Psest_0172 0.20 -0.1 166,898 - Psest_0172 0.20 +2.1 167,102 + Psest_0172 0.85 +0.8 167,102 + Psest_0172 0.85 +0.5 167,102 + Psest_0172 0.85 -1.7 167,103 - +1.8 167,103 - Psest_0172 0.85 +1.2 167,103 - Psest_0172 0.85 -2.8 167,433 - -0.4 167,433 - +0.9 167,454 - +0.6 167,454 - +0.4 167,454 - +0.0 167,454 - +0.9
Or see this region's nucleotide sequence