Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3479

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
3,647,223	-		Psest_3477	0.80	-0.1
3,647,223	-		Psest_3477	0.80	+0.0
3,647,507	+				-1.0
3,647,507	+				+0.2
3,647,507	+				+0.0
3,647,508	-				-0.9
3,647,547	+				+0.7
3,647,547	+				-0.6
3,647,561	+				+0.4
3,647,561	+				+2.3
3,647,561	+				-2.0
3,647,561	+				-0.5
3,647,561	+				+0.5
3,647,561	+				+1.6
3,647,562	-				-0.3
3,647,562	-				-1.0
3,647,562	-				-0.4
3,647,562	-				+0.6
3,647,562	-				-1.8
3,647,562	-				-0.4
3,647,590	+				-0.2
3,647,591	-				+0.3
3,647,626	-				+0.1
3,647,626	-				-1.9
3,647,886	+		Psest_3478	0.52	-0.4
3,647,887	-		Psest_3478	0.52	-1.0
3,648,094	-				+0.4
3,648,094	-				+0.8
3,648,233	+				-1.7
3,648,233	+				+1.1
3,648,233	+				-1.7
3,648,234	-				-0.5
3,648,806	+		Psest_3479	0.49	-2.0
3,648,821	+		Psest_3479	0.50	-0.6
3,648,821	+		Psest_3479	0.50	+0.3
3,648,822	-		Psest_3479	0.50	-0.7
3,648,822	-		Psest_3479	0.50	-0.7
3,648,822	-		Psest_3479	0.50	-0.1
3,649,053	+		Psest_3479	0.69	-0.9
3,649,054	-		Psest_3479	0.69	-1.6
3,649,817	+		Psest_3480	0.70	-1.1
3,649,817	+		Psest_3480	0.70	-1.3
3,649,896	-		Psest_3480	0.85	+0.3
3,649,896	-		Psest_3480	0.85	-2.0
3,650,053	+				+0.4
3,650,053	+				-0.4
3,650,053	+				-1.6
3,650,053	+				-0.1
3,650,054	-				+0.5
3,650,054	-				+0.8
3,650,054	-				+0.9
3,650,054	-				-1.2
3,650,054	-				+1.3
3,650,054	-				+1.2
3,650,054	-				-0.9
3,650,054	-				-0.2
3,650,054	-				-0.4
3,650,179	+				+0.4