Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2729

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
2,916,479	+		Psest_2728	0.71	-0.4
2,916,479	+		Psest_2728	0.71	-2.1
2,916,480	-		Psest_2728	0.71	+0.7
2,916,480	-		Psest_2728	0.71	-0.1
2,916,597	+		Psest_2728	0.76	-0.1
2,916,598	-		Psest_2728	0.76	+1.2
2,916,598	-		Psest_2728	0.76	-0.3
2,916,598	-		Psest_2728	0.76	+0.1
2,916,598	-		Psest_2728	0.76	-0.5
2,916,611	+		Psest_2728	0.77	+0.3
2,916,612	-		Psest_2728	0.77	+0.0
2,916,612	-		Psest_2728	0.77	-0.5
2,916,612	-		Psest_2728	0.77	-0.9
2,916,723	+		Psest_2728	0.81	+0.2
2,916,723	+		Psest_2728	0.81	+1.3
2,916,784	-		Psest_2728	0.84	-1.4
2,916,784	-		Psest_2728	0.84	-1.9
2,916,822	+		Psest_2728	0.85	+0.6
2,916,822	+		Psest_2728	0.85	+0.9
2,916,822	+		Psest_2728	0.85	+2.1
2,916,822	+		Psest_2728	0.85	+1.0
2,916,822	+		Psest_2728	0.85	-0.5
2,916,823	-		Psest_2728	0.85	+1.1
2,916,823	-		Psest_2728	0.85	-0.6
2,916,823	-		Psest_2728	0.85	-0.3
2,916,899	+		Psest_2728	0.88	-1.1
2,916,900	-		Psest_2728	0.88	-0.9
2,916,900	-		Psest_2728	0.88	+0.1
2,916,900	-		Psest_2728	0.88	-0.1
2,916,900	-		Psest_2728	0.88	+0.2
2,917,014	+				-1.6
2,917,014	+				+0.9
2,917,015	-				+0.2
2,917,015	-				+0.1
2,917,332	+				-1.1
2,917,333	-				+0.1
2,917,333	-				+1.0
2,917,333	-				-1.1
2,917,570	+		Psest_2729	0.20	+0.5
2,917,747	-		Psest_2729	0.31	-2.2
2,917,810	-		Psest_2729	0.35	-0.8
2,917,810	-		Psest_2729	0.35	-0.2
2,917,810	-		Psest_2729	0.35	-1.1
2,917,810	-		Psest_2729	0.35	-0.7
2,917,955	-		Psest_2729	0.44	-0.4
2,918,094	+		Psest_2729	0.53	-1.6
2,918,095	-		Psest_2729	0.53	-1.4
2,918,095	-		Psest_2729	0.53	-0.5
2,918,095	-		Psest_2729	0.53	-0.9
2,918,095	-		Psest_2729	0.53	-0.6
2,918,095	-		Psest_2729	0.53	-1.1
2,918,095	-		Psest_2729	0.53	+0.3
2,918,172	+		Psest_2729	0.58	+1.1
2,918,172	+		Psest_2729	0.58	-0.9
2,918,424	+		Psest_2729	0.74	-0.9
2,918,424	+		Psest_2729	0.74	+0.6
2,918,425	-		Psest_2729	0.74	-0.3
2,918,425	-		Psest_2729	0.74	-0.9
2,918,425	-		Psest_2729	0.74	-0.7
2,918,425	-		Psest_2729	0.74	-1.8
2,918,425	-		Psest_2729	0.74	-2.2
2,918,425	-		Psest_2729	0.74	+1.0
2,918,425	-		Psest_2729	0.74	-1.7
2,918,783	+				+1.0
2,918,820	+				-0.6
2,918,820	+				-1.1
2,918,821	-				+1.4
2,918,821	-				-0.6
2,918,821	-				-1.8
2,918,894	+				-0.6
2,918,895	-				+1.0
2,918,895	-				-0.8
2,918,971	-		Psest_2730	0.16	+1.0
2,918,971	-		Psest_2730	0.16	-1.1
2,919,266	+		Psest_2730	0.57	+0.6
2,919,266	+		Psest_2730	0.57	-0.6
2,919,266	+		Psest_2730	0.57	-2.5
2,919,267	-		Psest_2730	0.57	-0.1
2,919,267	-		Psest_2730	0.57	-0.5
2,919,267	-		Psest_2730	0.57	-1.6
2,919,504	-				-0.7
2,919,504	-				+2.4
2,919,624	+				-1.6
2,919,706	+				+0.5
2,919,723	-				-0.2
2,919,723	-				-0.1
2,919,723	-				+1.2
2,919,723	-				+2.0
2,919,723	-				-0.1
2,919,734	-				-0.1