Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2558

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
2,738,230	+		Psest_2556	0.52	+0.7
2,738,587	+		Psest_2556	0.86	-0.1
2,738,587	+		Psest_2556	0.86	+1.2
2,738,587	+		Psest_2556	0.86	-0.2
2,738,587	+		Psest_2556	0.86	+0.9
2,738,587	+		Psest_2556	0.86	+0.1
2,738,588	-		Psest_2556	0.86	-0.8
2,738,827	+				-0.4
2,738,838	-				-1.7
2,738,838	-				-0.3
2,738,910	+				-2.3
2,738,911	-				+0.1
2,738,911	-				+0.1
2,738,913	-				+0.7
2,738,992	+				+0.4
2,738,993	-				-1.1
2,738,995	-				+1.3
2,739,113	-		Psest_2557	0.64	-1.9
2,739,113	-		Psest_2557	0.64	-1.6
2,739,113	-		Psest_2557	0.64	-0.9
2,739,215	+				+0.1
2,739,215	+				+0.9
2,739,215	+				-0.5
2,739,216	-				+0.5
2,739,216	-				-0.5
2,739,216	-				-0.4
2,739,216	-				-1.0
2,739,216	-				-2.0
2,739,219	-				-0.7
2,739,219	-				+0.4
2,739,233	+				+1.3
2,739,233	+				-1.1
2,739,233	+				-0.7
2,739,233	+				-0.5
2,739,234	-				-0.5
2,739,234	-				-0.8
2,739,410	+		Psest_2558	0.24	+1.0
2,739,410	+		Psest_2558	0.24	+1.4
2,739,410	+		Psest_2558	0.24	-0.9
2,739,410	+		Psest_2558	0.24	+0.1
2,739,410	+		Psest_2558	0.24	-0.2
2,739,410	+		Psest_2558	0.24	+0.2
2,739,410	+		Psest_2558	0.24	+1.1
2,739,410	+		Psest_2558	0.24	+0.1
2,739,410	+		Psest_2558	0.24	-0.7
2,739,410	+		Psest_2558	0.24	+0.3
2,739,410	+		Psest_2558	0.24	+0.6
2,739,410	+		Psest_2558	0.24	+2.1
2,739,411	-		Psest_2558	0.24	-2.5
2,739,411	-		Psest_2558	0.24	+0.6
2,739,411	-		Psest_2558	0.24	+0.2
2,739,411	-		Psest_2558	0.24	-1.3
2,739,411	-		Psest_2558	0.24	-2.1
2,739,411	-		Psest_2558	0.24	-0.2
2,739,411	-		Psest_2558	0.24	+1.5
2,739,411	-		Psest_2558	0.24	+0.9
2,739,411	-		Psest_2558	0.24	+0.6
2,739,411	-		Psest_2558	0.24	+0.3
2,739,411	-		Psest_2558	0.24	-2.0
2,739,411	-		Psest_2558	0.24	-1.3
2,739,411	-		Psest_2558	0.24	+1.0
2,739,411	-		Psest_2558	0.24	+0.4
2,739,485	+		Psest_2558	0.31	-0.5
2,739,737	+		Psest_2558	0.56	+0.9
2,739,929	+		Psest_2558	0.75	+0.5
2,739,930	-		Psest_2558	0.75	-0.3
2,739,995	-		Psest_2558	0.82	-0.2
2,739,995	-		Psest_2558	0.82	+0.9
2,740,036	-		Psest_2558	0.86	+0.8
2,740,036	-		Psest_2558	0.86	+0.7
2,740,121	+				+0.5
2,740,121	+				-2.4
2,740,121	+				-0.4
2,740,121	+				-0.1
2,740,121	+				+0.4
2,740,121	+				-1.0
2,740,121	+				-0.6
2,740,121	+				+0.2
2,740,122	-				+0.8
2,740,122	-				+0.6
2,740,122	-				+0.4
2,740,122	-				-0.1
2,740,122	-				+0.3
2,740,122	-				-2.3
2,740,122	-				-1.3
2,740,122	-				-0.8
2,740,122	-				+0.4
2,740,158	+				-1.2
2,740,158	+				-2.6
2,740,340	+		Psest_2559	0.11	-1.7
2,740,340	+		Psest_2559	0.11	+0.1
2,740,340	+		Psest_2559	0.11	+0.3
2,740,340	+		Psest_2559	0.11	+0.4
2,740,341	-		Psest_2559	0.11	-0.4
2,740,370	+		Psest_2559	0.13	+2.4
2,740,370	+		Psest_2559	0.13	+0.5
2,740,370	+		Psest_2559	0.13	-0.0
2,740,370	+		Psest_2559	0.13	+1.3
2,740,371	-		Psest_2559	0.13	-2.0
2,740,371	-		Psest_2559	0.13	+1.1
2,740,455	-		Psest_2559	0.19	+0.5
2,740,455	-		Psest_2559	0.19	-2.0
2,740,455	-		Psest_2559	0.19	-0.9
2,740,491	-		Psest_2559	0.21	+0.3
2,740,565	+		Psest_2559	0.27	+0.4
2,740,566	-		Psest_2559	0.27	-1.9
2,740,752	-		Psest_2559	0.40	-0.3