Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2554

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
2,733,657	+		Psest_2552	0.89	-0.0
2,733,658	-		Psest_2552	0.89	-0.8
2,733,658	-		Psest_2552	0.89	+0.1
2,733,658	-		Psest_2552	0.89	+1.5
2,733,658	-		Psest_2552	0.89	-2.1
2,733,658	-		Psest_2552	0.89	+1.8
2,733,660	-		Psest_2552	0.89	-0.5
2,733,773	+				+0.6
2,733,774	-				-0.6
2,734,001	-				-1.6
2,734,290	+		Psest_2553	0.68	+2.2
2,734,388	-				+1.4
2,734,413	-				+0.0
2,734,426	+				+0.3
2,734,427	-				+1.3
2,734,430	+				-0.5
2,734,430	+				+0.4
2,734,431	-				+1.1
2,734,431	-				-0.3
2,734,431	-				+0.0
2,734,431	-				-0.5
2,734,697	+		Psest_2554	0.11	+0.5
2,734,698	-		Psest_2554	0.11	+0.9
2,734,812	-		Psest_2554	0.17	+0.3
2,734,812	-		Psest_2554	0.17	-0.6
2,734,949	+		Psest_2554	0.24	-1.1
2,734,949	+		Psest_2554	0.24	-0.2
2,734,949	+		Psest_2554	0.24	-0.9
2,734,949	+		Psest_2554	0.24	-0.7
2,734,949	+		Psest_2554	0.24	-0.7
2,734,950	-		Psest_2554	0.24	+0.3
2,734,950	-		Psest_2554	0.24	+0.4
2,734,950	-		Psest_2554	0.24	-0.5
2,734,950	-		Psest_2554	0.24	-0.6
2,735,037	-		Psest_2554	0.28	-1.5
2,735,201	+		Psest_2554	0.36	+0.1
2,735,202	-		Psest_2554	0.36	-1.0
2,735,202	-		Psest_2554	0.36	+1.0
2,735,202	-		Psest_2554	0.36	+0.9
2,735,216	+		Psest_2554	0.37	+1.4
2,735,217	-		Psest_2554	0.37	-0.1
2,735,217	-		Psest_2554	0.37	-0.5
2,735,217	-		Psest_2554	0.37	-0.8
2,735,390	+		Psest_2554	0.46	+1.3
2,735,390	+		Psest_2554	0.46	+0.8
2,735,390	+		Psest_2554	0.46	+0.4
2,735,390	+		Psest_2554	0.46	+0.9
2,735,390	+		Psest_2554	0.46	-0.1
2,735,390	+		Psest_2554	0.46	+0.0
2,735,390	+		Psest_2554	0.46	-0.7
2,735,391	-		Psest_2554	0.46	-1.3
2,735,391	-		Psest_2554	0.46	+1.1
2,735,391	-		Psest_2554	0.46	-1.1
2,735,391	-		Psest_2554	0.46	+0.5
2,735,493	+		Psest_2554	0.51	+1.1
2,735,494	-		Psest_2554	0.51	-1.5
2,735,619	+		Psest_2554	0.57	+1.1
2,735,619	+		Psest_2554	0.57	+1.1
2,735,619	+		Psest_2554	0.57	-1.0
2,735,620	-		Psest_2554	0.57	-2.2
2,735,653	+		Psest_2554	0.58	-1.2
2,735,653	+		Psest_2554	0.58	-0.5
2,735,653	+		Psest_2554	0.58	+0.2
2,735,654	-		Psest_2554	0.59	+0.4
2,735,852	+		Psest_2554	0.68	+0.2
2,735,930	+		Psest_2554	0.72	-1.8
2,735,931	-		Psest_2554	0.72	-0.2
2,735,993	+		Psest_2554	0.75	+1.3
2,735,993	+		Psest_2554	0.75	-1.5
2,735,993	+		Psest_2554	0.75	+0.5
2,735,993	+		Psest_2554	0.75	-1.6
2,735,994	-		Psest_2554	0.75	+0.7
2,735,994	-		Psest_2554	0.75	+1.1
2,736,164	+		Psest_2554	0.84	-1.4
2,736,164	+		Psest_2554	0.84	-1.2
2,736,237	+		Psest_2554	0.87	+0.8
2,736,238	-		Psest_2554	0.87	-1.8
2,736,513	+				+1.9
2,736,547	-				+0.7
2,736,633	+				+0.9
2,736,645	+				-1.5
2,736,649	+				+1.3
2,736,650	-				+1.1
2,736,688	+				-1.0
2,736,688	+				+0.7
2,736,688	+				+0.8
2,736,688	+				-0.7
2,736,688	+				+0.6
2,736,689	-				-0.3
2,736,689	-				+1.8
2,736,689	-				-0.0
2,736,689	-				-1.6
2,736,689	-				+0.7
2,736,689	-				+1.6
2,736,689	-				+0.2
2,736,689	-				+0.3
2,736,689	-				+1.0
2,736,689	-				+1.2
2,736,692	+				-1.3
2,736,692	+				+0.0
2,736,693	-				+0.3
2,736,693	-				+0.3
2,736,693	-				-0.0
2,736,917	+		Psest_2555	0.23	-0.8
2,736,918	-		Psest_2555	0.23	-1.9
2,736,918	-		Psest_2555	0.23	+0.3
2,737,085	+		Psest_2555	0.40	+0.8
2,737,085	+		Psest_2555	0.40	+0.8
2,737,085	+		Psest_2555	0.40	+0.5
2,737,085	+		Psest_2555	0.40	-0.2
2,737,085	+		Psest_2555	0.40	-0.6
2,737,085	+		Psest_2555	0.40	+0.5
2,737,086	-		Psest_2555	0.40	-2.7
2,737,086	-		Psest_2555	0.40	+0.6
2,737,086	-		Psest_2555	0.40	-0.7
2,737,086	-		Psest_2555	0.40	+1.6
2,737,172	+		Psest_2555	0.48	-0.8
2,737,173	-		Psest_2555	0.48	-1.5
2,737,251	-		Psest_2555	0.56	-0.2
2,737,346	+		Psest_2555	0.65	+0.0
2,737,346	+		Psest_2555	0.65	+1.8
2,737,346	+		Psest_2555	0.65	-0.7
2,737,346	+		Psest_2555	0.65	+0.1
2,737,347	-		Psest_2555	0.65	+1.1
2,737,347	-		Psest_2555	0.65	-1.0
2,737,347	-		Psest_2555	0.65	-0.5
2,737,368	-		Psest_2555	0.68	-0.2
2,737,368	-		Psest_2555	0.68	+0.6
2,737,464	-		Psest_2555	0.77	-0.4
2,737,464	-		Psest_2555	0.77	-1.1