Experiment: Methyl beta-D-glucopyranoside (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20150 and SM_b20151 are separated by 65 nucleotides SM_b20151 and SM_b20152 overlap by 7 nucleotides
SM_b20150: SM_b20150 - inositol monophosphatase, at 165,740 to 166,579
_b20150
SM_b20151: SM_b20151 - hypothetical protein, at 166,645 to 167,262
_b20151
SM_b20152: SM_b20152 - hypothetical protein, at 167,256 to 168,974
_b20152
Position (kb) 166
167
168 Strain fitness (log2 ratio) -2
-1
0
1 at 165.918 kb on + strand, within SM_b20150 at 165.919 kb on - strand, within SM_b20150 at 165.919 kb on - strand, within SM_b20150 at 165.984 kb on + strand, within SM_b20150 at 165.985 kb on - strand, within SM_b20150 at 166.130 kb on + strand, within SM_b20150 at 166.360 kb on + strand, within SM_b20150 at 166.528 kb on - strand at 166.817 kb on - strand, within SM_b20151 at 166.877 kb on + strand, within SM_b20151 at 166.878 kb on - strand, within SM_b20151 at 166.886 kb on - strand, within SM_b20151 at 166.886 kb on - strand, within SM_b20151 at 166.886 kb on - strand, within SM_b20151 at 166.942 kb on + strand, within SM_b20151 at 166.942 kb on + strand, within SM_b20151 at 166.942 kb on + strand, within SM_b20151 at 166.942 kb on + strand, within SM_b20151 at 166.943 kb on - strand, within SM_b20151 at 166.943 kb on - strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.945 kb on + strand, within SM_b20151 at 166.946 kb on - strand, within SM_b20151 at 166.946 kb on - strand, within SM_b20151 at 166.950 kb on - strand, within SM_b20151 at 167.098 kb on + strand, within SM_b20151 at 167.098 kb on + strand, within SM_b20151 at 167.491 kb on - strand, within SM_b20152 at 167.575 kb on - strand, within SM_b20152 at 167.575 kb on - strand, within SM_b20152 at 167.718 kb on + strand, within SM_b20152 at 167.718 kb on + strand, within SM_b20152 at 167.719 kb on - strand, within SM_b20152 at 167.719 kb on - strand, within SM_b20152 at 167.785 kb on - strand, within SM_b20152 at 167.872 kb on - strand, within SM_b20152 at 167.893 kb on - strand, within SM_b20152
Per-strain Table
Position Strand Gene LocusTag Fraction Methyl beta-D-glucopyranoside (C) remove 165,918 + SM_b20150 0.21 -0.2 165,919 - SM_b20150 0.21 -0.5 165,919 - SM_b20150 0.21 +0.5 165,984 + SM_b20150 0.29 +1.0 165,985 - SM_b20150 0.29 -0.1 166,130 + SM_b20150 0.46 -0.5 166,360 + SM_b20150 0.74 +0.8 166,528 - -0.7 166,817 - SM_b20151 0.28 -0.3 166,877 + SM_b20151 0.38 -0.2 166,878 - SM_b20151 0.38 -1.8 166,886 - SM_b20151 0.39 -0.0 166,886 - SM_b20151 0.39 -0.2 166,886 - SM_b20151 0.39 -0.4 166,942 + SM_b20151 0.48 +0.2 166,942 + SM_b20151 0.48 -0.2 166,942 + SM_b20151 0.48 +0.8 166,942 + SM_b20151 0.48 -0.9 166,943 - SM_b20151 0.48 -0.2 166,943 - SM_b20151 0.48 -0.4 166,945 + SM_b20151 0.49 -0.5 166,945 + SM_b20151 0.49 -0.3 166,945 + SM_b20151 0.49 -0.1 166,945 + SM_b20151 0.49 -1.5 166,945 + SM_b20151 0.49 -0.7 166,946 - SM_b20151 0.49 -0.5 166,946 - SM_b20151 0.49 -0.5 166,950 - SM_b20151 0.49 -1.5 167,098 + SM_b20151 0.73 -0.3 167,098 + SM_b20151 0.73 -0.1 167,491 - SM_b20152 0.14 +0.6 167,575 - SM_b20152 0.19 +0.1 167,575 - SM_b20152 0.19 +0.6 167,718 + SM_b20152 0.27 -0.6 167,718 + SM_b20152 0.27 -1.0 167,719 - SM_b20152 0.27 +0.1 167,719 - SM_b20152 0.27 -0.7 167,785 - SM_b20152 0.31 +0.7 167,872 - SM_b20152 0.36 +1.7 167,893 - SM_b20152 0.37 -0.1
Or see this region's nucleotide sequence