Experiment: Nickel (II) chloride 0.9 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0211 and Psest_0212 are separated by 226 nucleotides Psest_0212 and Psest_0213 overlap by 4 nucleotides
Psest_0211: Psest_0211 - hypothetical protein, at 212,206 to 213,102
_0211
Psest_0212: Psest_0212 - exodeoxyribonuclease V, gamma subunit, at 213,329 to 216,628
_0212
Psest_0213: Psest_0213 - exodeoxyribonuclease V, beta subunit, at 216,625 to 220,173
_0213
Position (kb) 213
214
215
216
217 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 212.395 kb on + strand, within Psest_0211 at 212.395 kb on + strand, within Psest_0211 at 212.395 kb on + strand, within Psest_0211 at 212.395 kb on + strand, within Psest_0211 at 212.395 kb on + strand, within Psest_0211 at 212.395 kb on + strand, within Psest_0211 at 212.395 kb on + strand, within Psest_0211 at 212.395 kb on + strand, within Psest_0211 at 212.395 kb on + strand, within Psest_0211 at 212.395 kb on + strand, within Psest_0211 at 212.396 kb on - strand, within Psest_0211 at 212.396 kb on - strand, within Psest_0211 at 212.396 kb on - strand, within Psest_0211 at 212.396 kb on - strand, within Psest_0211 at 212.407 kb on + strand, within Psest_0211 at 212.407 kb on + strand, within Psest_0211 at 212.407 kb on + strand, within Psest_0211 at 212.407 kb on + strand, within Psest_0211 at 212.407 kb on + strand, within Psest_0211 at 212.408 kb on - strand, within Psest_0211 at 212.471 kb on + strand, within Psest_0211 at 212.471 kb on + strand, within Psest_0211 at 212.471 kb on + strand, within Psest_0211 at 212.471 kb on + strand, within Psest_0211 at 212.471 kb on + strand, within Psest_0211 at 212.606 kb on + strand, within Psest_0211 at 212.606 kb on + strand, within Psest_0211 at 212.606 kb on + strand, within Psest_0211 at 212.606 kb on + strand, within Psest_0211 at 212.606 kb on + strand, within Psest_0211 at 212.606 kb on + strand, within Psest_0211 at 212.606 kb on + strand, within Psest_0211 at 212.606 kb on + strand, within Psest_0211 at 212.606 kb on + strand, within Psest_0211 at 212.606 kb on + strand, within Psest_0211 at 212.606 kb on + strand, within Psest_0211 at 212.606 kb on + strand, within Psest_0211 at 212.606 kb on + strand, within Psest_0211 at 212.606 kb on + strand, within Psest_0211 at 212.606 kb on + strand, within Psest_0211 at 212.607 kb on - strand, within Psest_0211 at 212.607 kb on - strand, within Psest_0211 at 212.607 kb on - strand, within Psest_0211 at 212.607 kb on - strand, within Psest_0211 at 212.607 kb on - strand, within Psest_0211 at 212.607 kb on - strand, within Psest_0211 at 212.607 kb on - strand, within Psest_0211 at 212.607 kb on - strand, within Psest_0211 at 212.607 kb on - strand, within Psest_0211 at 212.607 kb on - strand, within Psest_0211 at 212.607 kb on - strand, within Psest_0211 at 212.607 kb on - strand, within Psest_0211 at 212.607 kb on - strand, within Psest_0211 at 212.607 kb on - strand, within Psest_0211 at 212.609 kb on + strand, within Psest_0211 at 212.696 kb on + strand, within Psest_0211 at 212.696 kb on + strand, within Psest_0211 at 212.696 kb on + strand, within Psest_0211 at 212.696 kb on + strand, within Psest_0211 at 212.696 kb on + strand, within Psest_0211 at 212.697 kb on - strand, within Psest_0211 at 212.697 kb on - strand, within Psest_0211 at 212.697 kb on - strand, within Psest_0211 at 212.858 kb on + strand, within Psest_0211 at 212.858 kb on + strand, within Psest_0211 at 212.858 kb on + strand, within Psest_0211 at 212.858 kb on + strand, within Psest_0211 at 212.858 kb on + strand, within Psest_0211 at 212.858 kb on + strand, within Psest_0211 at 212.858 kb on + strand, within Psest_0211 at 212.858 kb on + strand, within Psest_0211 at 212.858 kb on + strand, within Psest_0211 at 212.858 kb on + strand, within Psest_0211 at 212.858 kb on + strand, within Psest_0211 at 212.858 kb on + strand, within Psest_0211 at 212.859 kb on - strand, within Psest_0211 at 212.859 kb on - strand, within Psest_0211 at 212.859 kb on - strand, within Psest_0211 at 212.859 kb on - strand, within Psest_0211 at 212.859 kb on - strand, within Psest_0211 at 212.859 kb on - strand, within Psest_0211 at 212.859 kb on - strand, within Psest_0211 at 212.859 kb on - strand, within Psest_0211 at 212.859 kb on - strand, within Psest_0211 at 212.859 kb on - strand, within Psest_0211 at 212.861 kb on + strand, within Psest_0211 at 213.064 kb on + strand at 213.064 kb on + strand at 213.064 kb on + strand at 213.065 kb on - strand at 213.065 kb on - strand at 213.065 kb on - strand at 213.065 kb on - strand at 213.132 kb on + strand at 213.158 kb on + strand at 213.159 kb on - strand at 213.159 kb on - strand at 213.174 kb on - strand at 213.174 kb on - strand at 213.174 kb on - strand at 213.180 kb on + strand at 213.301 kb on + strand at 213.302 kb on - strand at 213.510 kb on + strand at 214.103 kb on + strand, within Psest_0212 at 214.214 kb on + strand, within Psest_0212 at 214.214 kb on + strand, within Psest_0212 at 214.372 kb on - strand, within Psest_0212 at 214.524 kb on - strand, within Psest_0212
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.9 mM remove 212,395 + Psest_0211 0.21 -0.4 212,395 + Psest_0211 0.21 -0.1 212,395 + Psest_0211 0.21 -0.8 212,395 + Psest_0211 0.21 -0.7 212,395 + Psest_0211 0.21 -0.3 212,395 + Psest_0211 0.21 -1.4 212,395 + Psest_0211 0.21 +0.2 212,395 + Psest_0211 0.21 -0.6 212,395 + Psest_0211 0.21 +0.2 212,395 + Psest_0211 0.21 +0.8 212,396 - Psest_0211 0.21 -2.2 212,396 - Psest_0211 0.21 +1.7 212,396 - Psest_0211 0.21 -1.7 212,396 - Psest_0211 0.21 +0.1 212,407 + Psest_0211 0.22 -0.3 212,407 + Psest_0211 0.22 -0.0 212,407 + Psest_0211 0.22 +0.4 212,407 + Psest_0211 0.22 +2.0 212,407 + Psest_0211 0.22 +0.4 212,408 - Psest_0211 0.23 +1.5 212,471 + Psest_0211 0.30 -0.5 212,471 + Psest_0211 0.30 -1.6 212,471 + Psest_0211 0.30 -0.3 212,471 + Psest_0211 0.30 +1.3 212,471 + Psest_0211 0.30 -0.4 212,606 + Psest_0211 0.45 +1.5 212,606 + Psest_0211 0.45 +1.0 212,606 + Psest_0211 0.45 -0.7 212,606 + Psest_0211 0.45 -1.0 212,606 + Psest_0211 0.45 -1.2 212,606 + Psest_0211 0.45 -0.0 212,606 + Psest_0211 0.45 +1.2 212,606 + Psest_0211 0.45 +0.3 212,606 + Psest_0211 0.45 -0.9 212,606 + Psest_0211 0.45 -2.5 212,606 + Psest_0211 0.45 +0.2 212,606 + Psest_0211 0.45 -0.3 212,606 + Psest_0211 0.45 +2.7 212,606 + Psest_0211 0.45 +0.1 212,606 + Psest_0211 0.45 +2.4 212,607 - Psest_0211 0.45 -0.3 212,607 - Psest_0211 0.45 +3.2 212,607 - Psest_0211 0.45 -0.0 212,607 - Psest_0211 0.45 -0.3 212,607 - Psest_0211 0.45 +0.4 212,607 - Psest_0211 0.45 -0.6 212,607 - Psest_0211 0.45 -1.1 212,607 - Psest_0211 0.45 -0.0 212,607 - Psest_0211 0.45 -1.1 212,607 - Psest_0211 0.45 +1.2 212,607 - Psest_0211 0.45 +0.9 212,607 - Psest_0211 0.45 -1.2 212,607 - Psest_0211 0.45 -0.5 212,607 - Psest_0211 0.45 -0.9 212,609 + Psest_0211 0.45 -0.2 212,696 + Psest_0211 0.55 +1.3 212,696 + Psest_0211 0.55 -1.5 212,696 + Psest_0211 0.55 -0.6 212,696 + Psest_0211 0.55 -1.1 212,696 + Psest_0211 0.55 -0.1 212,697 - Psest_0211 0.55 -0.5 212,697 - Psest_0211 0.55 +0.5 212,697 - Psest_0211 0.55 -1.2 212,858 + Psest_0211 0.73 -0.1 212,858 + Psest_0211 0.73 +0.5 212,858 + Psest_0211 0.73 +1.6 212,858 + Psest_0211 0.73 +1.3 212,858 + Psest_0211 0.73 -0.5 212,858 + Psest_0211 0.73 -3.1 212,858 + Psest_0211 0.73 -0.5 212,858 + Psest_0211 0.73 -1.2 212,858 + Psest_0211 0.73 +1.2 212,858 + Psest_0211 0.73 -1.3 212,858 + Psest_0211 0.73 -0.1 212,858 + Psest_0211 0.73 +1.3 212,859 - Psest_0211 0.73 +1.3 212,859 - Psest_0211 0.73 +0.1 212,859 - Psest_0211 0.73 -1.4 212,859 - Psest_0211 0.73 -0.3 212,859 - Psest_0211 0.73 +0.5 212,859 - Psest_0211 0.73 +0.7 212,859 - Psest_0211 0.73 +1.4 212,859 - Psest_0211 0.73 -1.4 212,859 - Psest_0211 0.73 -0.4 212,859 - Psest_0211 0.73 -1.0 212,861 + Psest_0211 0.73 -0.3 213,064 + -1.8 213,064 + +0.4 213,064 + +0.1 213,065 - -1.6 213,065 - +1.8 213,065 - -1.5 213,065 - -0.6 213,132 + -0.7 213,158 + -0.5 213,159 - -1.8 213,159 - -0.8 213,174 - +1.2 213,174 - -0.4 213,174 - +0.3 213,180 + +0.7 213,301 + -0.5 213,302 - +0.5 213,510 + -1.0 214,103 + Psest_0212 0.23 -1.8 214,214 + Psest_0212 0.27 -0.4 214,214 + Psest_0212 0.27 -2.6 214,372 - Psest_0212 0.32 -1.2 214,524 - Psest_0212 0.36 -1.1
Or see this region's nucleotide sequence