Experiment: Nickel (II) chloride 0.9 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1325 and Psest_1326 are separated by 118 nucleotides Psest_1326 and Psest_1327 are separated by 146 nucleotides
Psest_1325: Psest_1325 - Molecular chaperone, at 1,426,260 to 1,427,525
_1325
Psest_1326: Psest_1326 - Uncharacterized conserved protein, at 1,427,644 to 1,428,552
_1326
Psest_1327: Psest_1327 - Superfamily II DNA/RNA helicases, SNF2 family, at 1,428,699 to 1,431,548
_1327
Position (kb)
1427
1428
1429 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1426.746 kb on + strand, within Psest_1325 at 1426.773 kb on + strand, within Psest_1325 at 1426.830 kb on - strand, within Psest_1325 at 1427.021 kb on + strand, within Psest_1325 at 1427.022 kb on - strand, within Psest_1325 at 1427.064 kb on + strand, within Psest_1325 at 1427.120 kb on + strand, within Psest_1325 at 1427.405 kb on + strand at 1427.554 kb on + strand at 1427.554 kb on + strand at 1427.554 kb on + strand at 1427.554 kb on + strand at 1427.554 kb on + strand at 1427.555 kb on - strand at 1427.555 kb on - strand at 1427.555 kb on - strand at 1427.603 kb on + strand at 1427.658 kb on - strand at 1428.148 kb on + strand, within Psest_1326 at 1428.148 kb on + strand, within Psest_1326 at 1428.148 kb on + strand, within Psest_1326 at 1428.148 kb on + strand, within Psest_1326 at 1428.149 kb on - strand, within Psest_1326 at 1428.242 kb on - strand, within Psest_1326 at 1428.478 kb on + strand at 1428.571 kb on + strand at 1428.571 kb on + strand at 1428.571 kb on + strand at 1428.571 kb on + strand at 1428.571 kb on + strand at 1428.571 kb on + strand at 1428.571 kb on + strand at 1428.571 kb on + strand at 1428.571 kb on + strand at 1428.571 kb on + strand at 1428.571 kb on + strand at 1428.571 kb on + strand at 1428.571 kb on + strand at 1428.572 kb on - strand at 1428.572 kb on - strand at 1428.572 kb on - strand at 1428.572 kb on - strand at 1428.572 kb on - strand at 1428.572 kb on - strand at 1428.572 kb on - strand at 1428.572 kb on - strand at 1428.572 kb on - strand at 1428.572 kb on - strand at 1429.022 kb on + strand, within Psest_1327 at 1429.022 kb on + strand, within Psest_1327 at 1429.312 kb on + strand, within Psest_1327 at 1429.312 kb on + strand, within Psest_1327 at 1429.312 kb on + strand, within Psest_1327 at 1429.313 kb on - strand, within Psest_1327 at 1429.446 kb on - strand, within Psest_1327 at 1429.447 kb on + strand, within Psest_1327 at 1429.447 kb on + strand, within Psest_1327 at 1429.447 kb on + strand, within Psest_1327 at 1429.447 kb on + strand, within Psest_1327 at 1429.447 kb on + strand, within Psest_1327 at 1429.447 kb on + strand, within Psest_1327 at 1429.447 kb on + strand, within Psest_1327 at 1429.447 kb on + strand, within Psest_1327 at 1429.448 kb on - strand, within Psest_1327 at 1429.448 kb on - strand, within Psest_1327 at 1429.448 kb on - strand, within Psest_1327 at 1429.448 kb on - strand, within Psest_1327 at 1429.448 kb on - strand, within Psest_1327 at 1429.448 kb on - strand, within Psest_1327 at 1429.448 kb on - strand, within Psest_1327 at 1429.448 kb on - strand, within Psest_1327 at 1429.448 kb on - strand, within Psest_1327 at 1429.448 kb on - strand, within Psest_1327 at 1429.448 kb on - strand, within Psest_1327 at 1429.448 kb on - strand, within Psest_1327 at 1429.448 kb on - strand, within Psest_1327 at 1429.448 kb on - strand, within Psest_1327 at 1429.448 kb on - strand, within Psest_1327
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.9 mM remove 1,426,746 + Psest_1325 0.38 +0.9 1,426,773 + Psest_1325 0.41 +0.1 1,426,830 - Psest_1325 0.45 -0.6 1,427,021 + Psest_1325 0.60 +0.2 1,427,022 - Psest_1325 0.60 +0.9 1,427,064 + Psest_1325 0.64 -0.1 1,427,120 + Psest_1325 0.68 +0.2 1,427,405 + -0.6 1,427,554 + +0.6 1,427,554 + +0.1 1,427,554 + +0.5 1,427,554 + +0.8 1,427,554 + +0.3 1,427,555 - +1.1 1,427,555 - -0.5 1,427,555 - -3.4 1,427,603 + -0.1 1,427,658 - -0.2 1,428,148 + Psest_1326 0.55 -1.4 1,428,148 + Psest_1326 0.55 +0.3 1,428,148 + Psest_1326 0.55 -1.2 1,428,148 + Psest_1326 0.55 -1.3 1,428,149 - Psest_1326 0.56 -1.6 1,428,242 - Psest_1326 0.66 -0.2 1,428,478 + -0.9 1,428,571 + -0.1 1,428,571 + +0.3 1,428,571 + +0.8 1,428,571 + -0.5 1,428,571 + +1.8 1,428,571 + -0.8 1,428,571 + -0.0 1,428,571 + +1.6 1,428,571 + +0.1 1,428,571 + +1.0 1,428,571 + +2.8 1,428,571 + -3.1 1,428,571 + -1.4 1,428,572 - -1.5 1,428,572 - -0.8 1,428,572 - +0.2 1,428,572 - -0.9 1,428,572 - +0.5 1,428,572 - -0.2 1,428,572 - -0.8 1,428,572 - -0.1 1,428,572 - -1.1 1,428,572 - -0.5 1,429,022 + Psest_1327 0.11 +0.4 1,429,022 + Psest_1327 0.11 -1.9 1,429,312 + Psest_1327 0.22 -0.2 1,429,312 + Psest_1327 0.22 -0.9 1,429,312 + Psest_1327 0.22 -0.5 1,429,313 - Psest_1327 0.22 -1.0 1,429,446 - Psest_1327 0.26 +0.8 1,429,447 + Psest_1327 0.26 +1.2 1,429,447 + Psest_1327 0.26 +0.1 1,429,447 + Psest_1327 0.26 +1.6 1,429,447 + Psest_1327 0.26 +0.7 1,429,447 + Psest_1327 0.26 -0.8 1,429,447 + Psest_1327 0.26 -0.6 1,429,447 + Psest_1327 0.26 +1.2 1,429,447 + Psest_1327 0.26 -0.8 1,429,448 - Psest_1327 0.26 +1.2 1,429,448 - Psest_1327 0.26 +1.6 1,429,448 - Psest_1327 0.26 -0.4 1,429,448 - Psest_1327 0.26 +0.3 1,429,448 - Psest_1327 0.26 -1.5 1,429,448 - Psest_1327 0.26 -1.9 1,429,448 - Psest_1327 0.26 +0.7 1,429,448 - Psest_1327 0.26 -1.4 1,429,448 - Psest_1327 0.26 +2.9 1,429,448 - Psest_1327 0.26 +1.8 1,429,448 - Psest_1327 0.26 +0.3 1,429,448 - Psest_1327 0.26 -0.6 1,429,448 - Psest_1327 0.26 +0.9 1,429,448 - Psest_1327 0.26 -1.5 1,429,448 - Psest_1327 0.26 +0.3
Or see this region's nucleotide sequence