Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3046

Experiment: Post-colonization (Day 12) - Cage6;Mouse1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Post-colonization (Day 12) - Cage6;Mouse1
3,855,836	+		BT3045	0.52	-2.0
3,855,837	-		BT3045	0.52	-0.1
3,855,837	-		BT3045	0.52	-1.0
3,855,837	-		BT3045	0.52	+1.2
3,855,925	+		BT3045	0.56	-1.1
3,855,925	+		BT3045	0.56	+2.3
3,855,928	-		BT3045	0.57	+1.1
3,856,019	-		BT3045	0.61	-1.1
3,856,054	-		BT3045	0.63	+0.7
3,856,097	+		BT3045	0.65	-2.4
3,856,151	-		BT3045	0.68	-0.3
3,856,157	-		BT3045	0.68	+0.8
3,856,174	-		BT3045	0.69	+0.2
3,856,179	+		BT3045	0.69	+0.0
3,856,205	-		BT3045	0.70	+1.9
3,856,206	+		BT3045	0.71	+1.3
3,856,207	-		BT3045	0.71	-2.3
3,856,213	+		BT3045	0.71	-0.7
3,856,224	+		BT3045	0.71	-0.7
3,856,225	-		BT3045	0.72	-1.7
3,856,313	+		BT3045	0.76	-0.7
3,856,333	-		BT3045	0.77	+2.2
3,856,348	-		BT3045	0.78	-1.0
3,856,385	-		BT3045	0.80	-0.8
3,856,443	+		BT3045	0.83	+1.8
3,856,450	+		BT3045	0.83	+0.9
3,856,455	+		BT3045	0.83	-0.6
3,856,455	+		BT3045	0.83	+1.1
3,856,456	-		BT3045	0.83	-0.2
3,856,459	+		BT3045	0.83	-0.5
3,856,460	-		BT3045	0.83	-0.8
3,856,513	+		BT3045	0.86	+0.5
3,856,514	-		BT3045	0.86	-3.1
3,856,604	+				-1.2
3,856,605	-				-0.1
3,856,607	+				+0.2
3,856,627	+				-1.5
3,856,627	+				+0.1
3,856,641	+				-1.3
3,856,641	+				+0.7
3,856,641	+				+1.7
3,856,649	-				+0.6
3,856,723	+				+0.5
3,856,724	-				+0.5
3,856,724	-				+0.5
3,856,724	-				+0.3
3,856,730	-				-1.0
3,856,771	-				-0.4
3,856,793	+				-1.4
3,856,813	+				+1.3
3,856,932	-				+1.8
3,856,949	+				-0.5
3,856,950	-				-0.2
3,856,950	-				+0.9
3,856,978	+				-0.5
3,856,978	+				-0.2
3,856,979	-				+1.3
3,856,985	-				-2.2
3,857,012	-				+1.7
3,857,090	-				+1.5
3,857,100	+				-0.7
3,857,100	+				-0.8
3,857,141	-		BT3046	0.10	-0.9
3,857,202	-		BT3046	0.12	+0.3
3,857,232	+		BT3046	0.13	+0.6
3,857,266	+		BT3046	0.14	+0.3
3,857,266	+		BT3046	0.14	-0.5
3,857,372	-		BT3046	0.18	-0.9
3,857,387	-		BT3046	0.18	+0.3
3,857,410	+		BT3046	0.19	-0.9
3,857,413	-		BT3046	0.19	+0.7
3,857,416	+		BT3046	0.19	+0.3
3,857,416	+		BT3046	0.19	+1.3
3,857,416	+		BT3046	0.19	+0.5
3,857,416	+		BT3046	0.19	-0.1
3,857,417	-		BT3046	0.19	-1.2
3,857,461	+		BT3046	0.20	+0.5
3,857,553	+		BT3046	0.23	-2.5
3,857,554	-		BT3046	0.23	-1.2
3,857,556	-		BT3046	0.23	-0.2
3,857,558	+		BT3046	0.24	+0.0
3,857,558	+		BT3046	0.24	-0.3
3,857,559	-		BT3046	0.24	-2.0
3,857,703	+		BT3046	0.28	-0.4
3,857,704	-		BT3046	0.28	-0.7
3,857,704	-		BT3046	0.28	+0.0
3,857,758	+		BT3046	0.30	+0.1
3,857,913	-		BT3046	0.35	-1.6
3,857,920	+		BT3046	0.35	-0.5
3,857,939	-		BT3046	0.36	-0.3
3,857,947	-		BT3046	0.36	+0.0
3,857,968	+		BT3046	0.37	+0.8
3,857,981	+		BT3046	0.37	-0.3
3,857,982	-		BT3046	0.37	+0.1
3,857,982	-		BT3046	0.37	-1.7
3,858,048	+		BT3046	0.39	+0.3
3,858,134	+		BT3046	0.42	-0.7
3,858,134	+		BT3046	0.42	+1.3
3,858,151	+		BT3046	0.43	+0.1
3,858,151	+		BT3046	0.43	-0.8
3,858,152	-		BT3046	0.43	-1.5
3,858,153	+		BT3046	0.43	-1.1
3,858,153	+		BT3046	0.43	-0.4
3,858,154	-		BT3046	0.43	-0.1
3,858,157	+		BT3046	0.43	-0.2
3,858,158	-		BT3046	0.43	+1.2
3,858,163	+		BT3046	0.43	-1.2
3,858,165	+		BT3046	0.43	-0.0
3,858,175	+		BT3046	0.43	+0.0
3,858,198	+		BT3046	0.44	+0.3
3,858,293	-		BT3046	0.47	-1.8
3,858,293	-		BT3046	0.47	-0.2
3,858,358	-		BT3046	0.49	+0.2
3,858,390	+		BT3046	0.50	-0.7
3,858,390	+		BT3046	0.50	-0.2
3,858,391	-		BT3046	0.50	-0.2
3,858,415	+				-0.2
3,858,460	-		BT3046	0.53	+0.2
3,858,462	+		BT3046	0.53	+0.5
3,858,464	+		BT3046	0.53	+0.8
3,858,465	-		BT3046	0.53	+0.8
3,858,507	+		BT3046	0.54	-0.2
3,858,507	+		BT3046	0.54	+1.3
3,858,508	-		BT3046	0.54	+0.7
3,858,508	-		BT3046	0.54	+1.2
3,858,512	-		BT3046	0.54	+1.9
3,858,522	-		BT3046	0.55	+1.3
3,858,610	+		BT3046	0.58	-1.3
3,858,610	+		BT3046	0.58	-0.3
3,858,611	-		BT3046	0.58	-1.1
3,858,621	+		BT3046	0.58	-0.7
3,858,632	+		BT3046	0.58	-0.2
3,858,633	-		BT3046	0.58	+1.1
3,858,636	+		BT3046	0.58	-0.2
3,858,636	+		BT3046	0.58	+1.1
3,858,637	-		BT3046	0.58	-0.2
3,858,691	-		BT3046	0.60	-0.3
3,858,737	+		BT3046	0.62	+1.3
3,858,737	+		BT3046	0.62	-1.1
3,858,748	+		BT3046	0.62	-0.5
3,858,752	-		BT3046	0.62	-1.8
3,858,785	-		BT3046	0.63	+0.3
3,858,785	-		BT3046	0.63	-1.7
3,858,796	+		BT3046	0.64	+0.1
3,858,826	+		BT3046	0.65	-0.2
3,858,855	+		BT3046	0.65	-0.4
3,858,856	-		BT3046	0.65	-0.8
3,858,881	-		BT3046	0.66	+0.8
3,858,886	+		BT3046	0.66	-0.1
3,858,886	+		BT3046	0.66	-2.7
3,858,887	-		BT3046	0.66	+2.0
3,858,899	-		BT3046	0.67	+1.1
3,858,937	+		BT3046	0.68	-0.2
3,858,937	+		BT3046	0.68	+1.8
3,858,937	+		BT3046	0.68	+0.9
3,858,938	-		BT3046	0.68	+0.0
3,858,941	+		BT3046	0.68	+0.9
3,858,941	+		BT3046	0.68	-1.4
3,858,941	+		BT3046	0.68	-0.3
3,858,941	+		BT3046	0.68	-0.1
3,858,962	-		BT3046	0.69	+0.4
3,859,005	+		BT3046	0.70	-0.5
3,859,006	-		BT3046	0.70	+0.6
3,859,006	-		BT3046	0.70	+0.1
3,859,006	-		BT3046	0.70	+0.5
3,859,096	-		BT3046	0.73	+0.3
3,859,161	-		BT3046	0.75	-1.4
3,859,186	-		BT3046	0.76	-0.1
3,859,186	-		BT3046	0.76	+1.3
3,859,192	-		BT3046	0.76	-0.2
3,859,214	-		BT3046	0.77	+1.8
3,859,220	+		BT3046	0.77	-0.7
3,859,234	+		BT3046	0.78	-0.6
3,859,234	+		BT3046	0.78	-0.2
3,859,247	-		BT3046	0.78	-1.2
3,859,251	-		BT3046	0.78	-0.7
3,859,285	-		BT3046	0.79	+0.8
3,859,286	+		BT3046	0.79	+1.7
3,859,287	-		BT3046	0.79	+2.0
3,859,408	+		BT3046	0.83	-0.1
3,859,408	+		BT3046	0.83	-1.5
3,859,409	-		BT3046	0.83	-0.2
3,859,415	-		BT3046	0.84	+1.3
3,859,459	+		BT3046	0.85	+1.0
3,859,553	-		BT3046	0.88	-2.2
3,859,563	-		BT3046	0.88	-0.1
3,859,595	+		BT3046	0.89	+0.7
3,859,642	+				-1.6
3,859,657	+				+0.2
3,859,658	-				+1.2
3,859,694	+				+0.4
3,859,694	+				-2.7
3,859,695	-				+0.3
3,859,695	-				-0.3
3,859,698	+				-1.2
3,859,714	+				-0.2
3,859,766	+				-0.5
3,859,805	+				-1.0
3,859,806	-				-1.0
3,859,806	-				-0.5
3,859,808	-				+2.1
3,859,845	+				-0.6
3,859,846	-				+0.3
3,859,867	-				-1.5
3,859,874	-				-0.6
3,859,895	+				+0.9
3,859,939	+				-0.2
3,859,960	+				-0.2
3,860,017	+				-1.1
3,860,021	+				+0.8
3,860,022	-				-2.5
3,860,025	-				-0.7
3,860,043	+				-1.7
3,860,103	-		BT3047	0.12	-0.7
3,860,103	-		BT3047	0.12	-1.8
3,860,106	+		BT3047	0.12	+0.8
3,860,106	+		BT3047	0.12	+1.3
3,860,106	+		BT3047	0.12	+0.3
3,860,107	-		BT3047	0.12	+1.3
3,860,144	+		BT3047	0.15	+0.0
3,860,151	+		BT3047	0.16	-0.4
3,860,151	+		BT3047	0.16	-0.3
3,860,152	-		BT3047	0.16	-0.3
3,860,160	-		BT3047	0.16	+0.0
3,860,204	+		BT3047	0.20	+0.9
3,860,204	+		BT3047	0.20	+0.3
3,860,205	-		BT3047	0.20	-0.2
3,860,255	+		BT3047	0.24	-2.0
3,860,267	+		BT3047	0.25	+0.1
3,860,298	-		BT3047	0.27	-0.5
3,860,342	+		BT3047	0.30	+0.2
3,860,346	+		BT3047	0.31	-0.1
3,860,346	+		BT3047	0.31	-0.5
3,860,350	+		BT3047	0.31	-0.7
3,860,350	+		BT3047	0.31	+0.1
3,860,350	+		BT3047	0.31	+1.3
3,860,372	+		BT3047	0.33	-0.5
3,860,374	+		BT3047	0.33	-0.5
3,860,433	-		BT3047	0.37	-3.0
3,860,433	-		BT3047	0.37	-0.7
3,860,448	+		BT3047	0.38	-0.1
3,860,456	+		BT3047	0.39	+1.2
3,860,482	-		BT3047	0.41	+1.2
3,860,485	+		BT3047	0.41	+0.4
3,860,485	+		BT3047	0.41	-0.2
3,860,488	+		BT3047	0.42	+0.5
3,860,489	-		BT3047	0.42	+0.2
3,860,547	-		BT3047	0.46	-1.0
3,860,600	+		BT3047	0.50	+0.0
3,860,600	+		BT3047	0.50	-0.2
3,860,603	+		BT3047	0.50	-0.3
3,860,626	+		BT3047	0.52	+0.8
3,860,640	-		BT3047	0.53	-1.7
3,860,691	+		BT3047	0.57	+0.8
3,860,729	+		BT3047	0.60	-0.2
3,860,729	+		BT3047	0.60	+0.4
3,860,730	-		BT3047	0.60	+0.3
3,860,749	-		BT3047	0.62	-1.0
3,860,753	+		BT3047	0.62	-1.5
3,860,778	+		BT3047	0.64	+0.7
3,860,779	-		BT3047	0.64	-1.2
3,860,845	-		BT3047	0.69	+1.5
3,860,862	-		BT3047	0.70	-0.7
3,860,864	+		BT3047	0.70	-0.2
3,860,868	+		BT3047	0.71	-0.5
3,860,869	-		BT3047	0.71	+0.3
3,860,887	+		BT3047	0.72	+0.5
3,860,887	+		BT3047	0.72	-2.5