Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21562 and SM_b21563 are separated by 130 nucleotides SM_b21563 and SM_b21564 are separated by 130 nucleotides SM_b21564 and SM_b21565 overlap by 4 nucleotides SM_b21565 and SM_b21566 are separated by 70 nucleotides
SM_b21562: SM_b21562 - hypothetical protein, at 1,102,296 to 1,102,847
_b21562
SM_b21563: SM_b21563 - transcriptional regulator, at 1,102,978 to 1,103,343
_b21563
SM_b21564: SM_b21564 - hypothetical protein, at 1,103,474 to 1,103,791
_b21564
SM_b21565: SM_b21565 - hypothetical protein, at 1,103,788 to 1,104,534
_b21565
SM_b21566: SM_b21566 - molecular chaperone GroEL, at 1,104,605 to 1,106,233
_b21566
Position (kb)
1103
1104
1105 Strain fitness (log2 ratio)
-2
-1
0
1 at 1102.930 kb on - strand at 1102.939 kb on + strand at 1102.955 kb on + strand at 1102.979 kb on + strand at 1103.343 kb on + strand at 1103.343 kb on + strand at 1103.344 kb on - strand at 1103.344 kb on - strand at 1103.344 kb on - strand at 1103.344 kb on - strand at 1103.353 kb on + strand at 1103.353 kb on + strand at 1103.354 kb on - strand at 1103.417 kb on + strand at 1103.417 kb on + strand at 1103.418 kb on - strand at 1103.418 kb on - strand at 1103.458 kb on + strand at 1103.459 kb on - strand at 1103.459 kb on - strand at 1103.507 kb on - strand, within SM_b21564 at 1103.537 kb on + strand, within SM_b21564 at 1103.538 kb on - strand, within SM_b21564 at 1103.538 kb on - strand, within SM_b21564 at 1103.546 kb on - strand, within SM_b21564 at 1103.551 kb on - strand, within SM_b21564 at 1103.653 kb on + strand, within SM_b21564 at 1103.685 kb on - strand, within SM_b21564 at 1103.749 kb on + strand, within SM_b21564 at 1103.749 kb on + strand, within SM_b21564 at 1103.750 kb on - strand, within SM_b21564 at 1103.934 kb on - strand, within SM_b21565 at 1103.934 kb on - strand, within SM_b21565 at 1103.934 kb on - strand, within SM_b21565 at 1103.934 kb on - strand, within SM_b21565 at 1104.301 kb on - strand, within SM_b21565 at 1104.301 kb on - strand, within SM_b21565 at 1104.304 kb on + strand, within SM_b21565 at 1104.304 kb on + strand, within SM_b21565 at 1104.304 kb on + strand, within SM_b21565 at 1104.304 kb on + strand, within SM_b21565 at 1104.305 kb on - strand, within SM_b21565 at 1104.353 kb on - strand, within SM_b21565 at 1104.427 kb on + strand, within SM_b21565 at 1104.454 kb on + strand, within SM_b21565 at 1104.455 kb on - strand, within SM_b21565 at 1104.532 kb on + strand at 1104.533 kb on - strand at 1104.606 kb on + strand at 1104.607 kb on - strand at 1104.765 kb on + strand at 1104.766 kb on - strand at 1104.766 kb on - strand at 1104.766 kb on - strand at 1104.778 kb on - strand, within SM_b21566 at 1104.778 kb on - strand, within SM_b21566 at 1104.804 kb on + strand, within SM_b21566 at 1104.946 kb on + strand, within SM_b21566 at 1104.947 kb on - strand, within SM_b21566 at 1104.947 kb on - strand, within SM_b21566 at 1105.155 kb on + strand, within SM_b21566 at 1105.155 kb on + strand, within SM_b21566 at 1105.156 kb on - strand, within SM_b21566 at 1105.156 kb on - strand, within SM_b21566 at 1105.273 kb on + strand, within SM_b21566 at 1105.274 kb on - strand, within SM_b21566 at 1105.349 kb on - strand, within SM_b21566
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,102,930 - -0.4 1,102,939 + +0.5 1,102,955 + +0.6 1,102,979 + -0.3 1,103,343 + +0.6 1,103,343 + -0.2 1,103,344 - -0.5 1,103,344 - -0.7 1,103,344 - -0.1 1,103,344 - -0.4 1,103,353 + -0.3 1,103,353 + -1.2 1,103,354 - +1.2 1,103,417 + -0.2 1,103,417 + -0.1 1,103,418 - +0.8 1,103,418 - -0.6 1,103,458 + -1.7 1,103,459 - -0.3 1,103,459 - +0.3 1,103,507 - SM_b21564 0.10 +0.2 1,103,537 + SM_b21564 0.20 +0.6 1,103,538 - SM_b21564 0.20 -1.9 1,103,538 - SM_b21564 0.20 -0.6 1,103,546 - SM_b21564 0.23 +0.2 1,103,551 - SM_b21564 0.24 +0.4 1,103,653 + SM_b21564 0.56 -0.8 1,103,685 - SM_b21564 0.66 -0.5 1,103,749 + SM_b21564 0.86 -0.7 1,103,749 + SM_b21564 0.86 +0.0 1,103,750 - SM_b21564 0.87 -0.4 1,103,934 - SM_b21565 0.20 +0.2 1,103,934 - SM_b21565 0.20 -0.6 1,103,934 - SM_b21565 0.20 -0.6 1,103,934 - SM_b21565 0.20 -0.5 1,104,301 - SM_b21565 0.69 -0.6 1,104,301 - SM_b21565 0.69 -0.4 1,104,304 + SM_b21565 0.69 -0.3 1,104,304 + SM_b21565 0.69 -0.0 1,104,304 + SM_b21565 0.69 -0.2 1,104,304 + SM_b21565 0.69 -0.3 1,104,305 - SM_b21565 0.69 -0.0 1,104,353 - SM_b21565 0.76 +1.1 1,104,427 + SM_b21565 0.86 -2.7 1,104,454 + SM_b21565 0.89 +0.6 1,104,455 - SM_b21565 0.89 +0.0 1,104,532 + -0.2 1,104,533 - +0.6 1,104,606 + -0.7 1,104,607 - -0.5 1,104,765 + -0.1 1,104,766 - -0.7 1,104,766 - +0.0 1,104,766 - +0.2 1,104,778 - SM_b21566 0.11 -0.3 1,104,778 - SM_b21566 0.11 +0.1 1,104,804 + SM_b21566 0.12 +0.2 1,104,946 + SM_b21566 0.21 +0.2 1,104,947 - SM_b21566 0.21 +0.6 1,104,947 - SM_b21566 0.21 -1.3 1,105,155 + SM_b21566 0.34 -1.2 1,105,155 + SM_b21566 0.34 -1.1 1,105,156 - SM_b21566 0.34 -0.3 1,105,156 - SM_b21566 0.34 +1.2 1,105,273 + SM_b21566 0.41 +0.8 1,105,274 - SM_b21566 0.41 -0.5 1,105,349 - SM_b21566 0.46 +0.0
Or see this region's nucleotide sequence