Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20887 and SM_b20888 are separated by 16 nucleotides SM_b20888 and SM_b20889 are separated by 95 nucleotides SM_b20889 and SM_b20890 are separated by 182 nucleotides
SM_b20887: SM_b20887 - hypothetical protein, at 1,292,876 to 1,293,817
_b20887
SM_b20888: SM_b20888 - hypothetical protein, at 1,293,834 to 1,294,652
_b20888
SM_b20889: SM_b20889 - hypothetical protein, at 1,294,748 to 1,295,452
_b20889
SM_b20890: SM_b20890 - L-arabonate dehydratase (EC 4.2.1.25) (from data) , at 1,295,635 to 1,297,374
_b20890
Position (kb)
1294
1295
1296 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1293.809 kb on + strand at 1293.810 kb on - strand at 1293.810 kb on - strand at 1293.810 kb on - strand at 1293.832 kb on - strand at 1293.838 kb on - strand at 1293.838 kb on - strand at 1293.838 kb on - strand at 1293.864 kb on + strand at 1293.864 kb on + strand at 1293.865 kb on - strand at 1293.883 kb on + strand at 1293.888 kb on + strand at 1293.888 kb on + strand at 1293.888 kb on + strand at 1293.888 kb on + strand at 1293.888 kb on + strand at 1293.889 kb on - strand at 1293.987 kb on + strand, within SM_b20888 at 1293.988 kb on - strand, within SM_b20888 at 1294.054 kb on + strand, within SM_b20888 at 1294.054 kb on + strand, within SM_b20888 at 1294.055 kb on - strand, within SM_b20888 at 1294.096 kb on + strand, within SM_b20888 at 1294.097 kb on - strand, within SM_b20888 at 1294.116 kb on + strand, within SM_b20888 at 1294.116 kb on + strand, within SM_b20888 at 1294.116 kb on + strand, within SM_b20888 at 1294.116 kb on + strand, within SM_b20888 at 1294.117 kb on - strand, within SM_b20888 at 1294.117 kb on - strand, within SM_b20888 at 1294.255 kb on + strand, within SM_b20888 at 1294.256 kb on - strand, within SM_b20888 at 1294.256 kb on - strand, within SM_b20888 at 1294.256 kb on - strand, within SM_b20888 at 1294.325 kb on - strand, within SM_b20888 at 1294.325 kb on - strand, within SM_b20888 at 1294.386 kb on + strand, within SM_b20888 at 1294.386 kb on + strand, within SM_b20888 at 1294.387 kb on - strand, within SM_b20888 at 1294.387 kb on - strand, within SM_b20888 at 1294.399 kb on - strand, within SM_b20888 at 1294.518 kb on + strand, within SM_b20888 at 1294.540 kb on + strand, within SM_b20888 at 1294.540 kb on + strand, within SM_b20888 at 1294.541 kb on - strand, within SM_b20888 at 1294.545 kb on + strand, within SM_b20888 at 1294.546 kb on - strand, within SM_b20888 at 1294.731 kb on + strand at 1294.732 kb on - strand at 1294.732 kb on - strand at 1294.803 kb on + strand at 1295.140 kb on + strand, within SM_b20889 at 1295.141 kb on - strand, within SM_b20889 at 1295.141 kb on - strand, within SM_b20889 at 1295.141 kb on - strand, within SM_b20889 at 1295.141 kb on - strand, within SM_b20889 at 1295.398 kb on + strand at 1295.399 kb on - strand at 1295.534 kb on + strand at 1295.542 kb on - strand at 1295.542 kb on - strand at 1295.542 kb on - strand at 1295.548 kb on + strand at 1295.724 kb on + strand at 1295.724 kb on + strand at 1295.724 kb on + strand at 1295.726 kb on + strand at 1295.726 kb on + strand at 1295.726 kb on + strand at 1295.727 kb on - strand at 1295.905 kb on - strand, within SM_b20890 at 1295.925 kb on - strand, within SM_b20890 at 1296.050 kb on + strand, within SM_b20890 at 1296.051 kb on - strand, within SM_b20890 at 1296.113 kb on + strand, within SM_b20890 at 1296.114 kb on - strand, within SM_b20890 at 1296.160 kb on - strand, within SM_b20890 at 1296.271 kb on + strand, within SM_b20890 at 1296.271 kb on + strand, within SM_b20890 at 1296.285 kb on - strand, within SM_b20890 at 1296.300 kb on + strand, within SM_b20890 at 1296.376 kb on - strand, within SM_b20890 at 1296.404 kb on + strand, within SM_b20890 at 1296.404 kb on + strand, within SM_b20890 at 1296.404 kb on + strand, within SM_b20890 at 1296.404 kb on + strand, within SM_b20890 at 1296.405 kb on - strand, within SM_b20890 at 1296.405 kb on - strand, within SM_b20890 at 1296.405 kb on - strand, within SM_b20890
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,293,809 + -0.1 1,293,810 - +1.4 1,293,810 - +0.4 1,293,810 - +0.4 1,293,832 - -1.2 1,293,838 - +0.0 1,293,838 - +0.6 1,293,838 - +0.1 1,293,864 + +0.1 1,293,864 + +0.6 1,293,865 - +0.0 1,293,883 + +0.8 1,293,888 + -0.4 1,293,888 + +0.3 1,293,888 + +0.3 1,293,888 + +0.1 1,293,888 + +1.2 1,293,889 - -0.3 1,293,987 + SM_b20888 0.19 +0.4 1,293,988 - SM_b20888 0.19 +0.4 1,294,054 + SM_b20888 0.27 +0.4 1,294,054 + SM_b20888 0.27 +0.3 1,294,055 - SM_b20888 0.27 +0.2 1,294,096 + SM_b20888 0.32 +0.9 1,294,097 - SM_b20888 0.32 +0.4 1,294,116 + SM_b20888 0.34 -0.7 1,294,116 + SM_b20888 0.34 -0.7 1,294,116 + SM_b20888 0.34 -0.5 1,294,116 + SM_b20888 0.34 +1.0 1,294,117 - SM_b20888 0.35 +0.2 1,294,117 - SM_b20888 0.35 -0.2 1,294,255 + SM_b20888 0.51 +0.9 1,294,256 - SM_b20888 0.52 +1.0 1,294,256 - SM_b20888 0.52 +0.8 1,294,256 - SM_b20888 0.52 +0.0 1,294,325 - SM_b20888 0.60 +1.1 1,294,325 - SM_b20888 0.60 -0.8 1,294,386 + SM_b20888 0.67 -1.5 1,294,386 + SM_b20888 0.67 -0.4 1,294,387 - SM_b20888 0.68 -0.0 1,294,387 - SM_b20888 0.68 +2.4 1,294,399 - SM_b20888 0.69 -0.2 1,294,518 + SM_b20888 0.84 -0.1 1,294,540 + SM_b20888 0.86 +0.0 1,294,540 + SM_b20888 0.86 -0.4 1,294,541 - SM_b20888 0.86 -0.4 1,294,545 + SM_b20888 0.87 +0.0 1,294,546 - SM_b20888 0.87 +0.5 1,294,731 + +0.2 1,294,732 - -0.8 1,294,732 - -0.1 1,294,803 + -0.1 1,295,140 + SM_b20889 0.56 +1.0 1,295,141 - SM_b20889 0.56 +1.6 1,295,141 - SM_b20889 0.56 -0.1 1,295,141 - SM_b20889 0.56 +1.1 1,295,141 - SM_b20889 0.56 +1.4 1,295,398 + -0.6 1,295,399 - -0.2 1,295,534 + -0.0 1,295,542 - +0.1 1,295,542 - -1.1 1,295,542 - -0.1 1,295,548 + +0.3 1,295,724 + +0.1 1,295,724 + -0.5 1,295,724 + -1.8 1,295,726 + +0.5 1,295,726 + +0.7 1,295,726 + -0.4 1,295,727 - -0.3 1,295,905 - SM_b20890 0.16 -1.5 1,295,925 - SM_b20890 0.17 -0.2 1,296,050 + SM_b20890 0.24 +0.6 1,296,051 - SM_b20890 0.24 +0.3 1,296,113 + SM_b20890 0.27 +0.2 1,296,114 - SM_b20890 0.28 +0.2 1,296,160 - SM_b20890 0.30 +0.4 1,296,271 + SM_b20890 0.37 -0.2 1,296,271 + SM_b20890 0.37 -0.4 1,296,285 - SM_b20890 0.37 -0.0 1,296,300 + SM_b20890 0.38 -0.0 1,296,376 - SM_b20890 0.43 +0.1 1,296,404 + SM_b20890 0.44 -0.4 1,296,404 + SM_b20890 0.44 +0.3 1,296,404 + SM_b20890 0.44 -0.4 1,296,404 + SM_b20890 0.44 +0.0 1,296,405 - SM_b20890 0.44 +1.1 1,296,405 - SM_b20890 0.44 -0.1 1,296,405 - SM_b20890 0.44 -1.0
Or see this region's nucleotide sequence