Experiment: Nickel (II) chloride 0.75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0651 and Psest_0652 overlap by 7 nucleotides Psest_0652 and Psest_0653 are separated by 153 nucleotides
Psest_0651: Psest_0651 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 706,630 to 709,023
_0651
Psest_0652: Psest_0652 - ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components, at 709,017 to 709,952
_0652
Psest_0653: Psest_0653 - Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain, at 710,106 to 711,161
_0653
Position (kb) 709
710 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 708.142 kb on - strand, within Psest_0651 at 708.447 kb on - strand, within Psest_0651 at 708.503 kb on + strand, within Psest_0651 at 708.503 kb on + strand, within Psest_0651 at 708.504 kb on - strand, within Psest_0651 at 708.504 kb on - strand, within Psest_0651 at 708.552 kb on - strand, within Psest_0651 at 708.552 kb on - strand, within Psest_0651 at 708.552 kb on - strand, within Psest_0651 at 708.611 kb on + strand, within Psest_0651 at 708.611 kb on + strand, within Psest_0651 at 708.612 kb on - strand, within Psest_0651 at 709.003 kb on + strand at 709.093 kb on + strand at 709.093 kb on + strand at 709.093 kb on + strand at 709.093 kb on + strand at 709.093 kb on + strand at 709.093 kb on + strand at 709.093 kb on + strand at 709.094 kb on - strand at 709.094 kb on - strand at 709.094 kb on - strand at 709.094 kb on - strand at 709.094 kb on - strand at 709.094 kb on - strand at 709.094 kb on - strand at 709.094 kb on - strand at 709.265 kb on + strand, within Psest_0652 at 709.265 kb on + strand, within Psest_0652 at 709.661 kb on + strand, within Psest_0652 at 709.662 kb on - strand, within Psest_0652 at 709.768 kb on - strand, within Psest_0652 at 709.840 kb on + strand, within Psest_0652 at 709.852 kb on + strand, within Psest_0652 at 709.952 kb on + strand at 709.952 kb on + strand at 709.952 kb on + strand at 709.953 kb on - strand at 710.031 kb on - strand at 710.031 kb on - strand at 710.422 kb on + strand, within Psest_0653
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.75 mM remove 708,142 - Psest_0651 0.63 +1.9 708,447 - Psest_0651 0.76 -0.2 708,503 + Psest_0651 0.78 +0.3 708,503 + Psest_0651 0.78 -1.1 708,504 - Psest_0651 0.78 -0.3 708,504 - Psest_0651 0.78 -2.0 708,552 - Psest_0651 0.80 -0.5 708,552 - Psest_0651 0.80 -0.5 708,552 - Psest_0651 0.80 +0.3 708,611 + Psest_0651 0.83 +0.4 708,611 + Psest_0651 0.83 +2.1 708,612 - Psest_0651 0.83 -1.5 709,003 + +0.2 709,093 + -0.6 709,093 + +0.6 709,093 + +1.5 709,093 + +1.2 709,093 + -0.7 709,093 + -0.5 709,093 + -1.4 709,094 - +0.9 709,094 - +0.1 709,094 - -1.1 709,094 - +0.3 709,094 - +1.2 709,094 - -1.5 709,094 - -0.8 709,094 - -1.1 709,265 + Psest_0652 0.26 -2.3 709,265 + Psest_0652 0.26 +1.6 709,661 + Psest_0652 0.69 +0.3 709,662 - Psest_0652 0.69 +2.4 709,768 - Psest_0652 0.80 +0.6 709,840 + Psest_0652 0.88 +1.5 709,852 + Psest_0652 0.89 +0.3 709,952 + +2.1 709,952 + -1.9 709,952 + -3.1 709,953 - -1.5 710,031 - -0.1 710,031 - -1.1 710,422 + Psest_0653 0.30 +2.5
Or see this region's nucleotide sequence