Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4155 and Psest_4156 are separated by 369 nucleotides Psest_4156 and Psest_4157 overlap by 4 nucleotides Psest_4157 and Psest_4158 are separated by 54 nucleotides
Psest_4155: Psest_4155 - Flagellin and related hook-associated proteins, at 4,336,927 to 4,337,763
_4155
Psest_4156: Psest_4156 - DNA-binding winged-HTH domains, at 4,338,133 to 4,338,963
_4156
Psest_4157: Psest_4157 - hypothetical protein, at 4,338,960 to 4,339,442
_4157
Psest_4158: Psest_4158 - Flagellar motor protein, at 4,339,497 to 4,340,435
_4158
Position (kb)
4338
4339 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4337.238 kb on + strand, within Psest_4155 at 4337.320 kb on + strand, within Psest_4155 at 4337.339 kb on + strand, within Psest_4155 at 4337.340 kb on - strand, within Psest_4155 at 4337.340 kb on - strand, within Psest_4155 at 4337.385 kb on + strand, within Psest_4155 at 4337.385 kb on + strand, within Psest_4155 at 4337.385 kb on + strand, within Psest_4155 at 4337.385 kb on + strand, within Psest_4155 at 4337.386 kb on - strand, within Psest_4155 at 4337.386 kb on - strand, within Psest_4155 at 4337.386 kb on - strand, within Psest_4155 at 4337.413 kb on - strand, within Psest_4155 at 4337.496 kb on + strand, within Psest_4155 at 4337.799 kb on + strand at 4337.799 kb on + strand at 4337.928 kb on + strand at 4337.928 kb on + strand at 4337.928 kb on + strand at 4337.928 kb on + strand at 4337.928 kb on + strand at 4337.928 kb on + strand at 4337.928 kb on + strand at 4337.928 kb on + strand at 4337.928 kb on + strand at 4337.928 kb on + strand at 4337.928 kb on + strand at 4337.928 kb on + strand at 4337.928 kb on + strand at 4337.928 kb on + strand at 4337.928 kb on + strand at 4337.928 kb on + strand at 4337.929 kb on - strand at 4337.929 kb on - strand at 4337.929 kb on - strand at 4337.929 kb on - strand at 4338.028 kb on - strand at 4338.038 kb on + strand at 4338.073 kb on + strand at 4338.099 kb on - strand at 4338.233 kb on - strand, within Psest_4156 at 4338.263 kb on + strand, within Psest_4156 at 4338.263 kb on + strand, within Psest_4156 at 4338.264 kb on - strand, within Psest_4156 at 4338.264 kb on - strand, within Psest_4156 at 4338.359 kb on - strand, within Psest_4156 at 4338.359 kb on - strand, within Psest_4156 at 4338.390 kb on + strand, within Psest_4156 at 4338.391 kb on - strand, within Psest_4156 at 4338.391 kb on - strand, within Psest_4156 at 4338.409 kb on + strand, within Psest_4156 at 4338.409 kb on + strand, within Psest_4156 at 4338.409 kb on + strand, within Psest_4156 at 4338.409 kb on + strand, within Psest_4156 at 4338.409 kb on + strand, within Psest_4156 at 4338.475 kb on + strand, within Psest_4156 at 4338.476 kb on - strand, within Psest_4156 at 4338.493 kb on + strand, within Psest_4156 at 4338.493 kb on + strand, within Psest_4156 at 4338.494 kb on - strand, within Psest_4156 at 4338.494 kb on - strand, within Psest_4156 at 4338.494 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.701 kb on - strand, within Psest_4156 at 4338.733 kb on + strand, within Psest_4156 at 4338.733 kb on + strand, within Psest_4156 at 4338.733 kb on + strand, within Psest_4156 at 4338.733 kb on + strand, within Psest_4156 at 4338.733 kb on + strand, within Psest_4156 at 4338.733 kb on + strand, within Psest_4156 at 4338.733 kb on + strand, within Psest_4156 at 4338.733 kb on + strand, within Psest_4156 at 4338.734 kb on - strand, within Psest_4156 at 4338.734 kb on - strand, within Psest_4156 at 4338.734 kb on - strand, within Psest_4156 at 4338.734 kb on - strand, within Psest_4156 at 4338.792 kb on - strand, within Psest_4156 at 4338.856 kb on + strand, within Psest_4156 at 4338.856 kb on + strand, within Psest_4156 at 4338.856 kb on + strand, within Psest_4156 at 4338.857 kb on - strand, within Psest_4156 at 4338.857 kb on - strand, within Psest_4156 at 4338.857 kb on - strand, within Psest_4156 at 4338.857 kb on - strand, within Psest_4156 at 4339.068 kb on + strand, within Psest_4157 at 4339.068 kb on + strand, within Psest_4157 at 4339.068 kb on + strand, within Psest_4157 at 4339.068 kb on + strand, within Psest_4157 at 4339.068 kb on + strand, within Psest_4157 at 4339.068 kb on + strand, within Psest_4157 at 4339.069 kb on - strand, within Psest_4157 at 4339.069 kb on - strand, within Psest_4157 at 4339.069 kb on - strand, within Psest_4157 at 4339.069 kb on - strand, within Psest_4157 at 4339.177 kb on - strand, within Psest_4157 at 4339.177 kb on - strand, within Psest_4157 at 4339.177 kb on - strand, within Psest_4157 at 4339.177 kb on - strand, within Psest_4157 at 4339.332 kb on + strand, within Psest_4157 at 4339.411 kb on - strand at 4339.525 kb on + strand at 4339.526 kb on - strand at 4339.526 kb on - strand at 4339.561 kb on + strand at 4339.561 kb on + strand at 4339.585 kb on + strand at 4339.662 kb on + strand, within Psest_4158 at 4339.663 kb on - strand, within Psest_4158
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 4,337,238 + Psest_4155 0.37 -1.2 4,337,320 + Psest_4155 0.47 -1.5 4,337,339 + Psest_4155 0.49 -1.1 4,337,340 - Psest_4155 0.49 +1.1 4,337,340 - Psest_4155 0.49 +0.2 4,337,385 + Psest_4155 0.55 -0.8 4,337,385 + Psest_4155 0.55 +0.9 4,337,385 + Psest_4155 0.55 -1.0 4,337,385 + Psest_4155 0.55 +1.7 4,337,386 - Psest_4155 0.55 -0.1 4,337,386 - Psest_4155 0.55 +1.0 4,337,386 - Psest_4155 0.55 +0.4 4,337,413 - Psest_4155 0.58 +0.8 4,337,496 + Psest_4155 0.68 +2.0 4,337,799 + -0.8 4,337,799 + -0.5 4,337,928 + -1.2 4,337,928 + +0.9 4,337,928 + +3.2 4,337,928 + -0.1 4,337,928 + +1.1 4,337,928 + -2.2 4,337,928 + +1.3 4,337,928 + -1.1 4,337,928 + -3.2 4,337,928 + -2.2 4,337,928 + -1.7 4,337,928 + +2.4 4,337,928 + -1.1 4,337,928 + +0.7 4,337,928 + +0.3 4,337,928 + +0.2 4,337,929 - -1.7 4,337,929 - +2.1 4,337,929 - -1.0 4,337,929 - -0.6 4,338,028 - -0.1 4,338,038 + -1.0 4,338,073 + +0.2 4,338,099 - +0.4 4,338,233 - Psest_4156 0.12 +1.0 4,338,263 + Psest_4156 0.16 -1.6 4,338,263 + Psest_4156 0.16 +1.5 4,338,264 - Psest_4156 0.16 -1.2 4,338,264 - Psest_4156 0.16 -1.6 4,338,359 - Psest_4156 0.27 +0.4 4,338,359 - Psest_4156 0.27 -0.6 4,338,390 + Psest_4156 0.31 -0.4 4,338,391 - Psest_4156 0.31 +0.8 4,338,391 - Psest_4156 0.31 +0.4 4,338,409 + Psest_4156 0.33 -2.4 4,338,409 + Psest_4156 0.33 +0.4 4,338,409 + Psest_4156 0.33 -0.1 4,338,409 + Psest_4156 0.33 +0.9 4,338,409 + Psest_4156 0.33 -1.1 4,338,475 + Psest_4156 0.41 +0.3 4,338,476 - Psest_4156 0.41 -1.2 4,338,493 + Psest_4156 0.43 +0.9 4,338,493 + Psest_4156 0.43 +0.2 4,338,494 - Psest_4156 0.43 +1.1 4,338,494 - Psest_4156 0.43 -0.2 4,338,494 - Psest_4156 0.43 +1.2 4,338,701 - Psest_4156 0.68 +0.3 4,338,701 - Psest_4156 0.68 -2.2 4,338,701 - Psest_4156 0.68 +0.8 4,338,701 - Psest_4156 0.68 +1.7 4,338,701 - Psest_4156 0.68 -1.3 4,338,701 - Psest_4156 0.68 +0.4 4,338,701 - Psest_4156 0.68 -0.5 4,338,701 - Psest_4156 0.68 -0.6 4,338,701 - Psest_4156 0.68 +1.4 4,338,701 - Psest_4156 0.68 -0.2 4,338,701 - Psest_4156 0.68 +2.8 4,338,701 - Psest_4156 0.68 +1.6 4,338,701 - Psest_4156 0.68 -0.8 4,338,701 - Psest_4156 0.68 +0.5 4,338,701 - Psest_4156 0.68 +0.6 4,338,701 - Psest_4156 0.68 +1.3 4,338,701 - Psest_4156 0.68 +0.1 4,338,701 - Psest_4156 0.68 -0.4 4,338,733 + Psest_4156 0.72 +1.3 4,338,733 + Psest_4156 0.72 +0.7 4,338,733 + Psest_4156 0.72 -1.7 4,338,733 + Psest_4156 0.72 -2.2 4,338,733 + Psest_4156 0.72 +1.8 4,338,733 + Psest_4156 0.72 +0.2 4,338,733 + Psest_4156 0.72 -1.6 4,338,733 + Psest_4156 0.72 -0.5 4,338,734 - Psest_4156 0.72 +2.0 4,338,734 - Psest_4156 0.72 -2.7 4,338,734 - Psest_4156 0.72 -0.1 4,338,734 - Psest_4156 0.72 -1.3 4,338,792 - Psest_4156 0.79 +1.2 4,338,856 + Psest_4156 0.87 -0.0 4,338,856 + Psest_4156 0.87 -2.5 4,338,856 + Psest_4156 0.87 +0.9 4,338,857 - Psest_4156 0.87 +1.2 4,338,857 - Psest_4156 0.87 +1.7 4,338,857 - Psest_4156 0.87 +0.4 4,338,857 - Psest_4156 0.87 -0.8 4,339,068 + Psest_4157 0.22 -1.2 4,339,068 + Psest_4157 0.22 -0.3 4,339,068 + Psest_4157 0.22 +0.5 4,339,068 + Psest_4157 0.22 -0.1 4,339,068 + Psest_4157 0.22 -0.5 4,339,068 + Psest_4157 0.22 +0.4 4,339,069 - Psest_4157 0.23 +0.8 4,339,069 - Psest_4157 0.23 -0.1 4,339,069 - Psest_4157 0.23 +0.0 4,339,069 - Psest_4157 0.23 -0.2 4,339,177 - Psest_4157 0.45 +0.7 4,339,177 - Psest_4157 0.45 -1.1 4,339,177 - Psest_4157 0.45 +0.4 4,339,177 - Psest_4157 0.45 -0.6 4,339,332 + Psest_4157 0.77 +2.6 4,339,411 - +0.3 4,339,525 + +0.1 4,339,526 - +1.1 4,339,526 - -0.5 4,339,561 + -1.2 4,339,561 + -1.2 4,339,585 + -1.0 4,339,662 + Psest_4158 0.18 +2.1 4,339,663 - Psest_4158 0.18 +0.2
Or see this region's nucleotide sequence