Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3688 and Psest_3689 overlap by 20 nucleotides Psest_3689 and Psest_3690 are separated by 12 nucleotides Psest_3690 and Psest_3691 are separated by 49 nucleotides Psest_3691 and Psest_3692 overlap by 4 nucleotides
Psest_3688: Psest_3688 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 3,853,372 to 3,854,178
_3688
Psest_3689: Psest_3689 - Acyl carrier protein, at 3,854,159 to 3,854,422
_3689
Psest_3690: Psest_3690 - Acyl carrier protein, at 3,854,435 to 3,854,692
_3690
Psest_3691: Psest_3691 - Predicted membrane protein, at 3,854,742 to 3,855,317
_3691
Psest_3692: Psest_3692 - Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, at 3,855,314 to 3,856,990
_3692
Position (kb)
3854
3855
3856 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3853.742 kb on + strand, within Psest_3688 at 3853.743 kb on - strand, within Psest_3688 at 3853.743 kb on - strand, within Psest_3688 at 3853.786 kb on + strand, within Psest_3688 at 3853.786 kb on + strand, within Psest_3688 at 3853.786 kb on + strand, within Psest_3688 at 3853.786 kb on + strand, within Psest_3688 at 3853.786 kb on + strand, within Psest_3688 at 3853.786 kb on + strand, within Psest_3688 at 3853.786 kb on + strand, within Psest_3688 at 3853.786 kb on + strand, within Psest_3688 at 3853.787 kb on - strand, within Psest_3688 at 3853.787 kb on - strand, within Psest_3688 at 3854.531 kb on + strand, within Psest_3690 at 3854.531 kb on + strand, within Psest_3690 at 3854.532 kb on - strand, within Psest_3690 at 3854.582 kb on - strand, within Psest_3690 at 3854.649 kb on + strand, within Psest_3690 at 3854.649 kb on + strand, within Psest_3690 at 3854.649 kb on + strand, within Psest_3690 at 3854.650 kb on - strand, within Psest_3690 at 3854.650 kb on - strand, within Psest_3690 at 3854.650 kb on - strand, within Psest_3690 at 3854.650 kb on - strand, within Psest_3690 at 3854.785 kb on + strand at 3854.785 kb on + strand at 3854.786 kb on - strand at 3854.835 kb on + strand, within Psest_3691 at 3854.836 kb on - strand, within Psest_3691 at 3854.978 kb on - strand, within Psest_3691 at 3855.130 kb on - strand, within Psest_3691 at 3855.131 kb on + strand, within Psest_3691 at 3855.131 kb on + strand, within Psest_3691 at 3855.131 kb on + strand, within Psest_3691 at 3855.231 kb on + strand, within Psest_3691 at 3855.232 kb on - strand, within Psest_3691 at 3855.232 kb on - strand, within Psest_3691 at 3855.232 kb on - strand, within Psest_3691 at 3855.232 kb on - strand, within Psest_3691 at 3855.232 kb on - strand, within Psest_3691 at 3855.232 kb on - strand, within Psest_3691 at 3855.232 kb on - strand, within Psest_3691 at 3855.339 kb on + strand at 3855.339 kb on + strand at 3855.339 kb on + strand at 3855.340 kb on - strand at 3855.531 kb on + strand, within Psest_3692 at 3855.531 kb on + strand, within Psest_3692 at 3855.833 kb on + strand, within Psest_3692 at 3855.834 kb on - strand, within Psest_3692 at 3856.106 kb on + strand, within Psest_3692 at 3856.107 kb on - strand, within Psest_3692 at 3856.107 kb on - strand, within Psest_3692
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 3,853,742 + Psest_3688 0.46 +0.6 3,853,743 - Psest_3688 0.46 -0.0 3,853,743 - Psest_3688 0.46 -1.1 3,853,786 + Psest_3688 0.51 +0.3 3,853,786 + Psest_3688 0.51 -1.5 3,853,786 + Psest_3688 0.51 +0.8 3,853,786 + Psest_3688 0.51 +0.5 3,853,786 + Psest_3688 0.51 -0.3 3,853,786 + Psest_3688 0.51 +0.5 3,853,786 + Psest_3688 0.51 +0.9 3,853,786 + Psest_3688 0.51 -0.4 3,853,787 - Psest_3688 0.51 +1.9 3,853,787 - Psest_3688 0.51 +0.0 3,854,531 + Psest_3690 0.37 +1.0 3,854,531 + Psest_3690 0.37 -1.4 3,854,532 - Psest_3690 0.38 +1.1 3,854,582 - Psest_3690 0.57 +1.0 3,854,649 + Psest_3690 0.83 +0.9 3,854,649 + Psest_3690 0.83 -0.1 3,854,649 + Psest_3690 0.83 -1.4 3,854,650 - Psest_3690 0.83 +0.5 3,854,650 - Psest_3690 0.83 +1.2 3,854,650 - Psest_3690 0.83 -1.2 3,854,650 - Psest_3690 0.83 +1.3 3,854,785 + +1.3 3,854,785 + -0.1 3,854,786 - -0.6 3,854,835 + Psest_3691 0.16 -1.1 3,854,836 - Psest_3691 0.16 -1.3 3,854,978 - Psest_3691 0.41 -1.0 3,855,130 - Psest_3691 0.67 -2.9 3,855,131 + Psest_3691 0.68 -1.0 3,855,131 + Psest_3691 0.68 -0.7 3,855,131 + Psest_3691 0.68 -0.1 3,855,231 + Psest_3691 0.85 -0.7 3,855,232 - Psest_3691 0.85 +0.2 3,855,232 - Psest_3691 0.85 -0.5 3,855,232 - Psest_3691 0.85 -0.5 3,855,232 - Psest_3691 0.85 -0.1 3,855,232 - Psest_3691 0.85 -0.6 3,855,232 - Psest_3691 0.85 -1.2 3,855,232 - Psest_3691 0.85 +0.2 3,855,339 + -2.2 3,855,339 + +0.1 3,855,339 + -0.7 3,855,340 - +0.7 3,855,531 + Psest_3692 0.13 -3.0 3,855,531 + Psest_3692 0.13 -1.8 3,855,833 + Psest_3692 0.31 -1.0 3,855,834 - Psest_3692 0.31 -0.1 3,856,106 + Psest_3692 0.47 -0.4 3,856,107 - Psest_3692 0.47 -1.0 3,856,107 - Psest_3692 0.47 -0.5
Or see this region's nucleotide sequence