Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3181

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,352,463	+		Psest_3180	0.57	-0.9
3,352,464	-		Psest_3180	0.57	-0.7
3,352,464	-		Psest_3180	0.57	-1.2
3,352,464	-		Psest_3180	0.57	-0.5
3,352,464	-		Psest_3180	0.57	+1.9
3,352,464	-		Psest_3180	0.57	-0.0
3,352,464	-		Psest_3180	0.57	-2.0
3,352,464	-		Psest_3180	0.57	-1.0
3,352,470	-		Psest_3180	0.57	-0.2
3,352,470	-		Psest_3180	0.57	+0.1
3,352,470	-		Psest_3180	0.57	-1.7
3,352,470	-		Psest_3180	0.57	+1.1
3,352,476	-		Psest_3180	0.58	-0.7
3,352,476	-		Psest_3180	0.58	-1.0
3,352,716	-		Psest_3180	0.74	-0.3
3,352,745	+		Psest_3180	0.76	-0.7
3,352,938	-		Psest_3180	0.89	-0.0
3,352,938	-		Psest_3180	0.89	-0.5
3,353,026	-				-1.2
3,353,250	-				-0.9
3,353,250	-				+0.6
3,353,250	-				+1.7
3,353,289	+				-0.5
3,353,289	+				-0.0
3,353,290	-				-2.3
3,353,331	-				+0.8
3,353,331	-				-0.2
3,353,331	-				-2.2
3,353,536	-		Psest_3181	0.30	-1.7
3,353,561	+		Psest_3181	0.34	-0.7
3,353,562	-		Psest_3181	0.34	-0.3
3,353,562	-		Psest_3181	0.34	-0.1
3,353,562	-		Psest_3181	0.34	+0.1
3,353,562	-		Psest_3181	0.34	-1.0
3,353,562	-		Psest_3181	0.34	-1.4
3,353,562	-		Psest_3181	0.34	-0.9
3,353,562	-		Psest_3181	0.34	-0.6
3,353,562	-		Psest_3181	0.34	-1.1
3,353,562	-		Psest_3181	0.34	-0.9
3,353,562	-		Psest_3181	0.34	-1.7
3,353,562	-		Psest_3181	0.34	-1.1
3,353,610	-		Psest_3181	0.40	-0.2
3,353,795	+		Psest_3181	0.66	-1.3
3,353,795	+		Psest_3181	0.66	+0.6
3,353,796	-		Psest_3181	0.67	+0.3
3,354,196	+		Psest_3182	0.17	-0.8
3,354,340	+		Psest_3182	0.31	+0.9
3,354,340	+		Psest_3182	0.31	-0.2
3,354,341	-		Psest_3182	0.32	-1.4
3,354,341	-		Psest_3182	0.32	-0.8
3,354,341	-		Psest_3182	0.32	-0.5
3,354,341	-		Psest_3182	0.32	-0.6
3,354,368	-		Psest_3182	0.34	+1.3
3,354,400	+		Psest_3182	0.38	-1.0
3,354,400	+		Psest_3182	0.38	+0.5
3,354,401	-		Psest_3182	0.38	-0.0
3,354,401	-		Psest_3182	0.38	-0.8
3,354,401	-		Psest_3182	0.38	+0.7
3,354,401	-		Psest_3182	0.38	-2.3
3,354,401	-		Psest_3182	0.38	-2.4
3,354,401	-		Psest_3182	0.38	+0.5
3,354,421	+		Psest_3182	0.40	+0.6
3,354,421	+		Psest_3182	0.40	-0.2
3,354,422	-		Psest_3182	0.40	-0.9
3,354,422	-		Psest_3182	0.40	-0.1
3,354,466	+		Psest_3182	0.44	+1.3
3,354,466	+		Psest_3182	0.44	-0.3
3,354,467	-		Psest_3182	0.44	-0.6
3,354,467	-		Psest_3182	0.44	-1.2
3,354,467	-		Psest_3182	0.44	-1.2
3,354,467	-		Psest_3182	0.44	-0.0
3,354,467	-		Psest_3182	0.44	-1.6
3,354,539	-		Psest_3182	0.52	-0.5
3,354,541	+		Psest_3182	0.52	+2.6
3,354,541	+		Psest_3182	0.52	-0.6
3,354,541	+		Psest_3182	0.52	-0.3
3,354,541	+		Psest_3182	0.52	-1.6
3,354,542	-		Psest_3182	0.52	-0.4
3,354,542	-		Psest_3182	0.52	+0.2
3,354,542	-		Psest_3182	0.52	+0.1
3,354,542	-		Psest_3182	0.52	-0.7
3,354,542	-		Psest_3182	0.52	-1.4
3,354,542	-		Psest_3182	0.52	+0.0
3,354,542	-		Psest_3182	0.52	-0.1
3,354,542	-		Psest_3182	0.52	-0.5
3,354,542	-		Psest_3182	0.52	-0.3
3,354,542	-		Psest_3182	0.52	-1.0
3,354,542	-		Psest_3182	0.52	-0.2
3,354,542	-		Psest_3182	0.52	-2.8
3,354,542	-		Psest_3182	0.52	+1.5
3,354,542	-		Psest_3182	0.52	-0.0
3,354,542	-		Psest_3182	0.52	+0.5
3,354,542	-		Psest_3182	0.52	-0.0
3,354,542	-		Psest_3182	0.52	+0.5
3,354,542	-		Psest_3182	0.52	-0.0
3,354,836	+		Psest_3182	0.82	+1.6
3,354,836	+		Psest_3182	0.82	-2.6
3,354,836	+		Psest_3182	0.82	-0.7
3,354,836	+		Psest_3182	0.82	-1.0
3,354,836	+		Psest_3182	0.82	-0.2
3,354,837	-		Psest_3182	0.82	+0.1
3,354,837	-		Psest_3182	0.82	-0.9
3,354,837	-		Psest_3182	0.82	-1.3
3,354,837	-		Psest_3182	0.82	-0.7
3,354,932	-				+0.1
3,354,932	-				-0.5
3,354,932	-				+1.5
3,354,932	-				+0.6
3,354,938	+				+2.4
3,354,938	+				-1.0
3,354,938	+				+0.6
3,354,938	+				-1.2
3,354,938	+				-1.2
3,354,938	+				-0.5
3,354,938	+				-1.3
3,354,939	-				+0.9
3,354,939	-				-0.5
3,354,939	-				+0.6
3,354,939	-				-1.0
3,354,939	-				+0.6
3,354,939	-				-0.4
3,354,939	-				-0.3
3,354,939	-				+2.2
3,354,970	+				-0.5
3,354,970	+				+1.1
3,354,970	+				+1.6