Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2973

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,166,726	-		Psest_2971	0.53	-1.0
3,166,821	+		Psest_2971	0.66	+0.8
3,166,821	+		Psest_2971	0.66	-0.8
3,166,822	-		Psest_2971	0.66	-1.4
3,166,822	-		Psest_2971	0.66	+1.9
3,166,899	+		Psest_2971	0.76	-0.3
3,167,029	-				-1.8
3,167,075	+				+2.9
3,167,075	+				+2.1
3,167,075	+				-1.4
3,167,075	+				+0.1
3,167,075	+				-0.5
3,167,076	-				+1.3
3,167,076	-				-0.7
3,167,076	-				-0.0
3,167,076	-				-1.4
3,167,076	-				+1.7
3,167,076	-				+0.5
3,167,495	+				+0.0
3,167,750	+		Psest_2973	0.41	+0.3
3,167,750	+		Psest_2973	0.41	-2.9
3,167,751	-		Psest_2973	0.41	-0.2
3,167,751	-		Psest_2973	0.41	-0.6
3,167,803	+		Psest_2973	0.52	-0.7
3,167,803	+		Psest_2973	0.52	-0.7
3,167,803	+		Psest_2973	0.52	-1.6
3,167,803	+		Psest_2973	0.52	-0.1
3,167,804	-		Psest_2973	0.52	-1.8
3,167,804	-		Psest_2973	0.52	-0.4
3,167,804	-		Psest_2973	0.52	-1.9
3,167,930	+		Psest_2973	0.79	-1.3
3,167,930	+		Psest_2973	0.79	+0.7
3,167,968	+		Psest_2973	0.87	-0.1
3,167,968	+		Psest_2973	0.87	+0.3
3,167,969	-		Psest_2973	0.87	-0.9
3,168,058	-				-0.6
3,168,091	+				+0.8
3,168,096	+				-0.6
3,168,096	+				-1.7
3,168,097	-				+0.5
3,168,097	-				+0.1
3,168,153	+				-1.6
3,168,153	+				-0.9
3,168,153	+				-0.6
3,168,153	+				+0.6
3,168,154	-				-1.7
3,168,154	-				-2.4
3,168,154	-				-1.0
3,168,154	-				-0.2
3,168,154	-				-0.8
3,168,155	+				-0.6
3,168,155	+				-1.5
3,168,155	+				-0.3
3,168,155	+				-1.4
3,168,155	+				+1.3
3,168,156	-				-0.6
3,168,156	-				-0.0
3,168,156	-				-0.2
3,168,156	-				+0.9
3,168,156	-				-1.4
3,168,156	-				-0.1
3,168,156	-				+0.4
3,168,156	-				+0.3
3,168,156	-				+0.7
3,168,156	-				+0.3
3,168,156	-				-0.3
3,168,217	+		Psest_2974	0.18	-0.8
3,168,217	+		Psest_2974	0.18	-2.2
3,168,218	-		Psest_2974	0.18	+0.6
3,168,218	-		Psest_2974	0.18	-1.4
3,168,347	+		Psest_2974	0.35	-1.3
3,168,347	+		Psest_2974	0.35	-2.0
3,168,347	+		Psest_2974	0.35	+2.0
3,168,348	-		Psest_2974	0.35	-1.6
3,168,402	+		Psest_2974	0.42	+1.2
3,168,403	-		Psest_2974	0.42	+0.0
3,168,403	-		Psest_2974	0.42	+1.5
3,168,419	+		Psest_2974	0.45	+0.3
3,168,420	-		Psest_2974	0.45	-1.0
3,168,565	+		Psest_2974	0.64	-2.4
3,168,627	-		Psest_2974	0.72	+1.1
3,168,627	-		Psest_2974	0.72	-1.0
3,168,646	-		Psest_2974	0.75	-0.1
3,168,900	+				-0.1
3,168,900	+				-0.6
3,168,964	+		Psest_2975	0.51	-0.7
3,168,993	+		Psest_2975	0.88	-1.4
3,168,993	+		Psest_2975	0.88	-1.6
3,168,994	-				-0.2
3,169,003	+				+1.0
3,169,003	+				-1.9
3,169,003	+				-0.2
3,169,003	+				-1.1
3,169,004	-				-0.9